RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 EIF2B5Q13144 721 aaKnown RBP20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 USP53Q70EK8 1073 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 SLC35F3Q8IY50 421 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 STK32AQ8WU08 396 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 FEM1CQ96JP0 617 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 C2orf49Q9BVC5 232 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 ATXN7L1Q9ULK2 861 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 SNX10Q9Y5X0 201 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 WASF2Q9Y6W5 498 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 PTPN13Q12923 2485 aa20.75■□□□□ 0.91
SQSTM1-215ENST00000514093 A0A0D9SEW6 157 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 GJB6O95452 261 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 ITGA2BP08514 1039 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 ADRB3P13945 408 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 SLC5A2P31639 672 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 NEK3P51956 506 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 SPIDRQ14159 915 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 KIAA1161Q6NSJ0 714 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 JAMLQ86YT9 394 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 ZNF606Q8WXB4 792 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 PPP1R16AQ96I34 528 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 PPP1R13BQ96KQ4 1090 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 KLF6Q99612 283 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 BOCQ9BWV1 1114 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 FADS3Q9Y5Q0 445 aa20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 UBR5O95071 2799 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-215ENST00000514093 IGLON5A6NGN9 336 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 FPGTO14772 594 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 TPP1O14773 563 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 NOBOXO60393 691 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 FAM87AP0C7U9 286 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 HGFP14210 728 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 ITGB6P18564 788 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 RECQLP46063 649 aaPredicted RBP20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 GCNT1Q02742 428 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 C1QBPQ07021 282 aaKnown RBP20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 SGCGQ13326 291 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 PDCLQ13371 301 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 PRRT3Q5FWE3 981 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 ZNF658Q5TYW1 1059 aaPredicted RBP20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 C22orf39Q6P5X5 142 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 ATG14Q6ZNE5 492 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 B3GNT8Q7Z7M8 397 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 FBXO39Q8N4B4 442 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 SGF29Q96ES7 293 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 SLC2A13Q96QE2 648 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 EPB41L5Q9HCM4 733 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 STARD5Q9NSY2 213 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 SPASTQ9UBP0 616 aa20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 PNMA8BQ9ULN7 279 aaPredicted RBP20.73■□□□□ 0.91
SQSTM1-215ENST00000514093 AGRPO00253 132 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 PMM2O15305 246 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 THAP12O43422 761 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 ZNF821O75541 412 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 ADCY5O95622 1261 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 MLLT3P42568 568 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 RPIAP49247 311 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 DNA2P51530 1060 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 KRT85P78386 507 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 C5orf22Q49AR2 442 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 CCDC40Q4G0X9 1142 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 EHBP1Q8NDI1 1231 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 GLMNQ92990 594 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 GTPBP4Q9BZE4 634 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 ANLNQ9NQW6 1124 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 APOBEC3BQ9UH17 382 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 PADI4Q9UM07 663 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 CNTN6Q9UQ52 1028 aa20.72■□□□□ 0.91
SQSTM1-215ENST00000514093 PLD2O14939 933 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 YY2O15391 372 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 SUV39H1O43463 412 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 MED7O43513 233 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 CETN1Q12798 172 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 PARS2Q7L3T8 475 aaKnown RBP20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 RAB11FIP2Q7L804 512 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 TFAP2DQ7Z6R9 452 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 WDTC1Q8N5D0 677 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 OR7D4Q8NG98 312 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 BTN2A2Q8WVV5 523 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 NAT6Q93015 286 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 SNX21Q969T3 373 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 LENG8Q96PV6 779 aaPredicted RBP20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 SPON2Q9BUD6 331 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 C1QTNF2Q9BXJ5 285 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 FOXP3Q9BZS1 431 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 RMND1Q9NWS8 449 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 MPP6Q9NZW5 540 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 GULP1Q9UBP9 304 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 GGT7Q9UJ14 662 aa20.71■□□□□ 0.91
SQSTM1-215ENST00000514093 BSNQ9UPA5 3926 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 NTN3O00634 580 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 ANXA6P08133 673 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 CELA2BP08218 269 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 ITGB7P26010 798 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 GNA15P30679 374 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 L1CAMP32004 1257 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 UGT1A5P35504 534 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 CLCN6P51797 869 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 PFN3P60673 137 aa20.7■□□□□ 0.9
SQSTM1-215ENST00000514093 LRRC63Q05C16 580 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms