RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 BTN2A2Q8WVV5 523 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PPP1R16AQ96I34 528 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 TIGD1Q96MW7 591 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 RPRD1AQ96P16 312 aaPredicted RBP14.23□□□□□ -0.13
SPCS3-204ENST00000513139 KLF15Q9UIH9 416 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PCDHB4Q9Y5E5 795 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 RELNP78509 3460 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 TMX2-CTNND1H3BSU7 103 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 NTN3O00634 580 aaPredicted RBP14.22□□□□□ -0.13
SPCS3-204ENST00000513139 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
SPCS3-204ENST00000513139 NOBOXO60393 691 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 CLDN11O75508 207 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 JUNDP17535 347 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 SLC5A2P31639 672 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 CCR1P32246 355 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 LRMPQ12912 555 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 CAMK4Q16566 473 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 DEFB133Q30KQ1 61 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 C14orf80Q86SX3 495 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 EXTL1Q92935 676 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 TBATAQ96M53 351 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 LENG8Q96PV6 779 aaPredicted RBP14.22□□□□□ -0.13
SPCS3-204ENST00000513139 MED15Q96RN5 788 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 C2orf49Q9BVC5 232 aaPredicted RBP14.22□□□□□ -0.13
SPCS3-204ENST00000513139 THAP9Q9H5L6 903 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 SPASTQ9UBP0 616 aa14.22□□□□□ -0.13
SPCS3-204ENST00000513139 IPO11Q9UI26 975 aaKnown RBP14.22□□□□□ -0.13
SPCS3-204ENST00000513139 SPTBN1Q01082 2364 aaKnown RBP14.21□□□□□ -0.13
SPCS3-204ENST00000513139 LMO7DNF2Z398 122 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 MUSKO15146 869 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 PMM2O15305 246 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 AP1G1O43747 822 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 PAK4O96013 591 aaPredicted RBP14.21□□□□□ -0.13
SPCS3-204ENST00000513139 MT-CO1P00395 513 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 NEK3P51956 506 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 NFKB2Q00653 900 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 CENPCQ03188 943 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 AUHQ13825 339 aaKnown RBP14.21□□□□□ -0.13
SPCS3-204ENST00000513139 FGL2Q14314 439 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 MEA1Q16626 185 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 C5orf22Q49AR2 442 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 SLC35F3Q8IY50 421 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 ATP11CQ8NB49 1132 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 LMX1AQ8TE12 382 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 SLC35C1Q96A29 364 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 NT5C1BQ96P26 610 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 CCDC3Q9BQI4 270 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 SLC4A5Q9BY07 1137 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 SEPT3Q9UH03 358 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 IL36AQ9UHA7 158 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 MYO9AB2RTY4 2548 aa14.21□□□□□ -0.13
SPCS3-204ENST00000513139 UTP20O75691 2785 aaKnown RBP14.21□□□□□ -0.14
SPCS3-204ENST00000513139 FPGTO14772 594 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 RAD51BO15315 384 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 NVLO15381 856 aaKnown RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 CDH4P55283 916 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 FKBP3Q00688 224 aaKnown RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 PDE1CQ14123 709 aaPredicted RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 ARSIQ5FYB1 569 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 CRTC1Q6UUV9 634 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 TMEM110Q86TL2 294 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 PPM1KQ8N3J5 372 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 FBXO39Q8N4B4 442 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 PTCD2Q8WV60 388 aaKnown RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 ASB12Q8WXK4 309 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 PSMB7Q99436 277 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 KLF6Q99612 283 aaPredicted RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 C1QTNF2Q9BXJ5 285 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 STRADBQ9C0K7 418 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 MUC3BQ9H195 1237 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 ARMCX3Q9UH62 379 aaPredicted RBP14.2□□□□□ -0.14
SPCS3-204ENST00000513139 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 PADI4Q9UM07 663 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 FADS3Q9Y5Q0 445 aa14.2□□□□□ -0.14
SPCS3-204ENST00000513139 NOTCH2Q04721 2471 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 LRRK1Q38SD2 2015 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 RNF103O00237 685 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 SPINT1O43278 529 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 PPFIA2O75334 1257 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 GCATO75600 419 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 GLI1P08151 1106 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 FAM87AP0C7U9 286 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 LIPCP11150 499 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 GP1BBP13224 206 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 ADRB3P13945 408 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 ITGB7P26010 798 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 UGT1A5P35504 534 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 RECQLP46063 649 aaPredicted RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 FMO5P49326 533 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 IRAK1P51617 712 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 PFN3P60673 137 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 PITX1P78337 314 aaPredicted RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 CDK17Q00537 523 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 EIF2B5Q13144 721 aaKnown RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 SGCGQ13326 291 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms