RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TRIM25Q14258 630 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ARHGAP22Q7Z5H3 698 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PTGR2Q8N8N7 351 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PGLYRP2Q96PD5 576 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ACE2Q9BYF1 805 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 EFR3BQ9Y2G0 817 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 SMIM31A0A1B0GVY4 71 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MYL12BO14950 172 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ITGA2BP08514 1039 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 NUP62P37198 522 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PSEN1P49768 467 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PLCL1Q15111 1095 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PIGZQ86VD9 579 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 TEKT5Q96M29 485 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 GAD1Q99259 594 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ATAD3AQ9NVI7 634 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 COL5A2P05997 1499 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 GUCY1B2O75343 617 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 CAPSQ13938 189 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MFSD4BQ5TF39 518 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 WSCD1Q658N2 575 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 CDC73Q6P1J9 531 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 USP45Q70EL2 814 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PPP3R2Q96LZ3 170 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 CCDC3Q9BQI4 270 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 C2orf49Q9BVC5 232 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 PRPF19Q9UMS4 504 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 SNX6Q9UNH7 406 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 BAZ2BQ9UIF8 2168 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ATXN2Q99700 1313 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ATP5C1P36542 298 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 TTPAP49638 278 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 NR1H2P55055 460 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 MAGEB10Q96LZ2 347 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-210ENST00000512756 ZSCAN32Q9NX65 697 aa12.62□□□□□ -0.39
COL11A1-210ENST00000512756 COX7A2P14406 83 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ANPEPP15144 967 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ADCYAP1R1P41586 468 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 AIF1P55008 147 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 FGD3Q5JSP0 725 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 LIPMQ5VYY2 423 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ATL1Q8WXF7 558 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 CENPIQ92674 756 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 GRIP2Q9C0E4 1043 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 CYLDQ9NQC7 956 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 RPS6KA6Q9UK32 745 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 MROH1Q8NDA8 1641 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SF3B1O75533 1304 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PPLO60437 1756 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ADARP55265 1226 aaKnown RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 XIAPP98170 497 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ALFQ53S48 1182 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 AFTPHQ6ULP2 937 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ST13P5Q8NFI4 369 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SELENOMQ8WWX9 145 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 UBE2E3Q969T4 207 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 BBS4Q96RK4 519 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 GTF2A1LQ9UNN4 478 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 KPNA5O15131 536 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SNAP91O60641 907 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 WFS1O76024 890 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PCDH8O95206 1070 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PAX7P23759 505 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 RPL5P46777 297 aaKnown RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 ZC3H12AQ5D1E8 599 aaKnown RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 NEK10Q6ZWH5 1172 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 TSPAN14Q8NG11 270 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 KLQ9UEF7 1012 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 GNPTGQ9UJJ9 305 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PTCH2Q9Y6C5 1203 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PIPSLA2A3N6 862 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 PDE9AO76083 593 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 TFEBP19484 476 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 NOS3P29474 1203 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 GRIA3P42263 894 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 RPL7AP62424 266 aaKnown RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SLC20A2Q08357 652 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 NRF1Q16656 503 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-210ENST00000512756 LRRC52Q8N7C0 313 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 TNFRSF25Q93038 417 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 SPRTNQ9H040 489 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms