RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 ACVRL1P37023 503 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PSMD8P48556 350 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 STK19P49842 368 aaPredicted RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PAPOLAP51003 745 aaKnown RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 TPMTP51580 245 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 IRAK1P51617 712 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 SUOXP51687 545 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RWDD2BP57060 319 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RPS14P62263 151 aaKnown RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 POLR2LP62875 67 aaKnown RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 CREB5Q02930 508 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ZNF33AQ06730 810 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 DPYSQ14117 519 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PDK1Q15118 436 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 TEAD4Q15561 434 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PLK5Q496M5 336 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RAB6CQ53S08 254 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ANKRD20A8PQ5CZ79 823 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 TFDP3Q5H9I0 405 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RALGPS1Q5JS13 557 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 LINGO4Q6UY18 593 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 Q6ZVU0 165 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PEX26Q7Z412 305 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RFX6Q8HWS3 928 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 LRRC8AQ8IWT6 810 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RGL4Q8IZJ4 473 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 STK40Q8N2I9 435 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 HDDC3Q8N4P3 179 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ARFGAP1Q8N6T3 406 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ZNF366Q8N895 744 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 CCNYQ8ND76 341 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 OR2AP1Q8NGE2 309 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 FRS2Q8WU20 508 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PTPRN2Q92932 1015 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RAB7BQ96AH8 199 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 LRRC45Q96CN5 670 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 HAUS1Q96CS2 278 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 HMCESQ96FZ2 354 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 PSMB7Q99436 277 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 MKRN2Q9H000 416 aaKnown RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 RAB6CQ9H0N0 254 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 DUSP15Q9H1R2 295 aaPredicted RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 LRRC19Q9H756 370 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ATP13A3Q9H7F0 1226 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 VPS45Q9NRW7 570 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 C2orf42Q9NWW7 574 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 USP36Q9P275 1121 aaKnown RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 HECAQ9UBI9 543 aaPredicted RBP7.6□□□□□ -1.19
NR1I3-231ENST00000512340 ZNF212Q9UDV6 495 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 AMACRQ9UHK6 382 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 COL4A3Q01955 1670 aa7.6□□□□□ -1.19
NR1I3-231ENST00000512340 CKAP5Q14008 2032 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 NUP205Q92621 2012 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 IGHV1OR15-9A0A0B4J2B8 117 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 MACROD2A1Z1Q3 448 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 KRIT1O00522 736 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 DCLK1O15075 740 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 MAGEC1O60732 1142 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 ZMPSTE24O75844 475 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 STK10O94804 968 aaKnown RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 TMCC1O94876 653 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 TJP3O95049 919 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 EPN2O95208 641 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 SERPINA4P29622 427 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 CSNK1DP48730 415 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 NR2C2P49116 596 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 NEK3P51956 506 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 COPAP53621 1224 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 ATXN3P54252 364 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 AP1S1P61966 158 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 NSUN2Q08J23 767 aaKnown RBP eCLIP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 DMWDQ09019 674 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 DPYSL3Q14195 570 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 CA9Q16790 459 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 MYLK3Q32MK0 819 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 MAP7D1Q3KQU3 841 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 MARC1Q5VT66 337 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 PMS2CLQ68D20 193 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 ERAP2Q6P179 960 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 NEK5Q6P3R8 708 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 RAD9BQ6WBX8 426 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 PRPF39Q86UA1 669 aaKnown RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 FAM124AQ86V42 546 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 CACUL1Q86Y37 369 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 SYT12Q8IV01 421 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 KATNAL2Q8IYT4 538 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 FAM160A2Q8N612 972 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-231ENST00000512340 OTUD6BQ8N6M0 293 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 TTC13Q8NBP0 860 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 OR2T34Q8NGX1 318 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 EXD1Q8NHP7 514 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 FAM71BQ8TC56 605 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 HCAR2Q8TDS4 363 aa7.59□□□□□ -1.19
NR1I3-231ENST00000512340 RLN3Q8WXF3 142 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms