RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CCNHP51946 323 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 MPP1Q00013 466 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 POLIQ9UNA4 740 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 LMTK3Q96Q04 1460 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 FAM196BA6NMK8 535 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 GSSP48637 474 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 NIPAL1Q6NVV3 410 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 CNSTQ6PJW8 725 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 HIPK1Q86Z02 1210 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 POF1BQ8WVV4 589 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 SIGLEC16A6NMB1 481 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 ELK3P41970 407 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 BST2Q10589 180 aaKnown RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 DPYSL3Q14195 570 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 LCN1P1Q5VSP4 162 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 TYW3Q6IPR3 259 aaKnown RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 CENPNQ96H22 339 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 ACTR6Q9GZN1 396 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 KCTD10Q9H3F6 313 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 MID1IP1Q9NPA3 183 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 RCOR3Q9P2K3 495 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 LOC100506127A0A0U1RQW1 187 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 PSMA1P25786 263 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 HTR7P34969 479 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ALDH6A1Q02252 535 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 SMCO1Q147U7 214 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 HKDC1Q2TB90 917 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SLITRK4Q8IW52 837 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SP8Q8IXZ3 490 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 KCNH7Q9NS40 1196 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 TRPS1Q9UHF7 1281 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 LRRC42Q9Y546 428 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 ZNF177Q13360 481 aaPredicted RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 ABCB10Q9NRK6 738 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SMIM22K7EJ46 135 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 EZH2Q15910 746 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 COLGALT1Q8NBJ5 622 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 CLPTM1LQ96KA5 538 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 TMEM121Q9BTD3 319 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ZCWPW1Q9H0M4 648 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 DPP3Q9NY33 737 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 GJB6O95452 261 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ARPP19P56211 112 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 CAMK1Q14012 370 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 TDRD10Q5VZ19 366 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 C4orf19Q8IY42 314 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 EEF1AKMT1Q8WVE0 214 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 MED11Q9P086 117 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 MLXQ9UH92 298 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 AKAP3O75969 853 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SGPL1O95470 568 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 TROAPQ12815 778 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 GK3PQ14409 553 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 KLHL18O94889 574 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ATP12AP54707 1039 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 AIF1P55008 147 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SF3B3Q15393 1217 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 ZSWIM7Q19AV6 140 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 PCID2Q5JVF3 399 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 ZNF670Q9BS34 389 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 EHD4Q9H223 541 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 SMPD3Q9NY59 655 aaPredicted RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 ASMTLO95671 621 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 PABPC4LP0CB38 370 aaKnown RBP8.46□□□□□ -1.06
HTT-208ENST00000510626 EFR3AQ14156 821 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 PITRM1Q5JRX3 1037 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 CHPFQ8IZ52 775 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 AASSQ9UDR5 926 aa8.46□□□□□ -1.06
HTT-208ENST00000510626 AIREO43918 545 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 PRMT3O60678 531 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 TAF6P49848 677 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 TRIM40Q6P9F5 258 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 SPATA19Q7Z5L4 167 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ZFP28Q8NHY6 868 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 FAM84AQ96KN4 292 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 TRNAU1APQ9NX07 287 aaKnown RBP8.45□□□□□ -1.06
HTT-208ENST00000510626 PSME2Q9UL46 239 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ARPC4-TTLL3A0A0A6YYG9 625 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 F5H5T6 163 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 PGRMC2O15173 223 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 PMPCBO75439 489 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ZNF45Q02386 682 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 CSHL1Q14406 222 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ACCSLQ4AC99 568 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ATG14Q6ZNE5 492 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 CHMP1BQ7LBR1 199 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ITCHQ96J02 903 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 SHCBP1LQ9BZQ2 653 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 SALL1Q9NSC2 1324 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 ZW10O43264 779 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 DOK7Q18PE1 504 aa8.45□□□□□ -1.06
HTT-208ENST00000510626 DALRD3Q5D0E6 543 aaKnown RBP8.45□□□□□ -1.06
HTT-208ENST00000510626 ZSCAN18Q8TBC5 510 aaPredicted RBP8.45□□□□□ -1.06
HTT-208ENST00000510626 RANBP3Q9H6Z4 567 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms