RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 PTENP60484 403 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 GPC5P78333 572 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 HSD11B2P80365 405 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 CSTF1Q05048 431 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 GIT2Q14161 759 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 LRRC32Q14392 662 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PTPRRQ15256 657 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ANGPT1Q15389 498 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NPY5RQ15761 445 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 MAPK6Q16659 721 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PXDC1Q5TGL8 231 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ATF7IP2Q5U623 682 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 VWA1Q6PCB0 445 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 DCLRE1AQ6PJP8 1040 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 TSSK4Q6SA08 328 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PARM1Q6UWI2 310 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 TMEM184AQ6ZMB5 413 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ZNF782Q6ZMW2 699 aaPredicted RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 USP43Q70EL4 1123 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 YTHDF3Q7Z739 585 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 CATSPER3Q86XQ3 398 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PASD1Q8IV76 773 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 C4orf19Q8IY42 314 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 DCLK2Q8N568 766 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 UBR7Q8N806 425 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 CNNM3Q8NE01 707 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NSUN7Q8NE18 718 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 SLC35B2Q8TB61 432 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ITFG1Q8TB96 612 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NSMCE1Q8WV22 266 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 GTF3C6Q969F1 213 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 C18orf25Q96B23 403 aaPredicted RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 MFSD3Q96ES6 412 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 FBXL20Q96IG2 436 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ZBTB45Q96K62 511 aaPredicted RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 PGLYRP2Q96PD5 576 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 MED15Q96RN5 788 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 TMEM175Q9BSA9 504 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 RPP25Q9BUL9 199 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 HERC2P3Q9BVR0 1158 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 CCDC94Q9BW85 323 aaPredicted RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 FAM126AQ9BYI3 521 aaPredicted RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 AGXT2Q9BYV1 514 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 TM6SF1Q9BZW5 370 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NT5C3AQ9H0P0 336 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PDZD7Q9H5P4 517 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 DHX33Q9H6R0 707 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 UBN1Q9NPG3 1134 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ANKEF1Q9NU02 776 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 DDX19AQ9NUU7 478 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 FAM30AQ9NZY2 134 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 LRWD1Q9UFC0 647 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 DPP7Q9UHL4 492 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 PADI4Q9UM07 663 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NOL7Q9UMY1 257 aaKnown RBP3.2□□□□□ -1.9
GYPB-211ENST00000510196 SSX2IPQ9Y2D8 614 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ZKSCAN5Q9Y2L8 839 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 CDY1Q9Y6F8 540 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 NUMBLQ9Y6R0 609 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 ATG2AQ2TAZ0 1938 aa3.2□□□□□ -1.9
GYPB-211ENST00000510196 SF3B1O75533 1304 aaKnown RBP eCLIP3.19□□□□□ -1.92e-6■■■■■ 43.1
GYPB-211ENST00000510196 STK36Q9NRP7 1315 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 PTPRZ1P23471 2315 aaPredicted RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 VWA3AA6NCI4 1184 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 PRR23AA6NEV1 266 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 SERINC4A6NH21 518 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 KRT86O43790 486 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 SOAT2O75908 522 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 EDN1P05305 212 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 PDGFRBP09619 1106 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 OR4Q2P0C623 313 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 LAMP2P13473 410 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 MT3P25713 68 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 AXLP30530 894 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 IGFALSP35858 605 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 ARL2P36404 184 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 ID4P47928 161 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 GUCY2FP51841 1108 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 DSG1Q02413 1049 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 CEBPZQ03701 1054 aaKnown RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 GRIK3Q13003 919 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 STRN3Q13033 797 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 DMP1Q13316 513 aaPredicted RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 KCNC3Q14003 757 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 KRT81Q14533 505 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 PPP2R5AQ15172 486 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 TAF12Q16514 161 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 CTXN3Q4LDR2 81 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 PABPC1LQ4VXU2 614 aaKnown RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 PRAMEF14Q5SWL7 426 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 KRT79Q5XKE5 535 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 ATG9BQ674R7 924 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 MOXD1Q6UVY6 613 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 DSTYKQ6XUX3 929 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 TPRG1Q6ZUI0 275 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 MEPCEQ7L2J0 689 aaKnown RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 MRPL10Q7Z7H8 261 aaKnown RBP3.19□□□□□ -1.9
GYPB-211ENST00000510196 USP37Q86T82 979 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 TTC30AQ86WT1 665 aa3.19□□□□□ -1.9
GYPB-211ENST00000510196 YAF2Q8IY57 180 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms