RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
KDM3B-206ENST00000509468 DRC7Q8IY82 874 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 GRIN3AQ8TCU5 1115 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 KLK6Q92876 244 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
KDM3B-206ENST00000509468 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 SELENOOQ9BVL4 669 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 TMEM248Q9NWD8 314 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
KDM3B-206ENST00000509468 SIK3Q9Y2K2 1263 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 IGF2RP11717 2491 aa12.88□□□□□ -0.35
KDM3B-206ENST00000509468 SPEGQ15772 3267 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 AP1G1O43747 822 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 CALB1P05937 261 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 ADRB3P13945 408 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 GPD1P21695 349 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 ACADVLP49748 655 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 UBXN1Q04323 297 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 SGCGQ13326 291 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 SLFN11Q7Z7L1 901 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 MARCH9Q86YJ5 346 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 CACTIN-AS1Q8N1I8 211 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 SLC25A45Q8N413 288 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 TRPM6Q9BX84 2022 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 TDRD6O60522 2096 aaKnown RBP12.87□□□□□ -0.35
KDM3B-206ENST00000509468 CHD5Q8TDI0 1954 aa12.87□□□□□ -0.35
KDM3B-206ENST00000509468 MYLKQ15746 1914 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 ZSCAN5CA6NGD5 496 aaPredicted RBP12.86□□□□□ -0.35
KDM3B-206ENST00000509468 TSPAN6O43657 245 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 KDELR3O43731 214 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 RAMP2O60895 175 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
KDM3B-206ENST00000509468 PRLRP16471 622 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 DGKAP23743 735 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 ACP1P24666 158 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 HDAC4P56524 1084 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 MYL5Q02045 173 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 RAD51Q06609 339 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 CLEC16AQ2KHT3 1053 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 MANEALQ5VSG8 457 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 Q6ZSR6 202 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 FAM172AQ8WUF8 416 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 CASKIN2Q8WXE0 1202 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 ARHGEF26Q96DR7 871 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
KDM3B-206ENST00000509468 ERGIC2Q96RQ1 377 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 PCDHB18PQ96TA0 734 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 AGPAT1Q99943 283 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 MYOCQ99972 504 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 DONSONQ9NYP3 566 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 ZFR2Q9UPR6 939 aaKnown RBP12.86□□□□□ -0.35
KDM3B-206ENST00000509468 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 RAXQ9Y2V3 346 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
KDM3B-206ENST00000509468 FADS3Q9Y5Q0 445 aa12.86□□□□□ -0.35
KDM3B-206ENST00000509468 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
KDM3B-206ENST00000509468 C16orf96A6NNT2 1141 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 A6NNZ2 444 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 RNF103O00237 685 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 NEMP1O14524 444 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 EPHB6O15197 1021 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 SIGLEC6O43699 453 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 SDC3O75056 442 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 LRIG2O94898 1065 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 CD160O95971 181 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 GSRP00390 522 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 ALPPL2P10696 532 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 DESP17661 470 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 ACVRL1P37023 503 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 AIF1P55008 147 aa12.85□□□□□ -0.35
KDM3B-206ENST00000509468 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
KDM3B-206ENST00000509468 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
KDM3B-206ENST00000509468 TARDBPQ13148 414 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms