RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 LRP4O75096 1905 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 MCF2LO15068 1137 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 ALOX15BO15296 676 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 PLRG1O43660 514 aaKnown RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 F9P00740 461 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 GKP32189 559 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 ADRA1BP35368 520 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 STAT1P42224 750 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 RXRGP48443 463 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 CLDN6P56747 220 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 RPL7AP62424 266 aaKnown RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 KRT83P78385 493 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 STAT4Q14765 748 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 HES3Q5TGS1 186 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 C22orf39Q6P5X5 142 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 WDR59Q6PJI9 974 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 KDM7AQ6ZMT4 941 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 LEKR1Q6ZMV7 388 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 DPY19L3Q6ZPD9 716 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 IRF2BP2Q7Z5L9 587 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 PHF13Q86YI8 300 aaPredicted RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 DCAF4L2Q8NA75 395 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 TSC1Q92574 1164 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 CENPIQ92674 756 aaPredicted RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 UBL7Q96S82 380 aaPredicted RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 MYOCQ99972 504 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 NRSN2Q9GZP1 204 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 NOL6Q9H6R4 1146 aaKnown RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 FCF1Q9Y324 198 aaKnown RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 RP1P56715 2156 aa11.14□□□□□ -0.63
RNF4-212ENST00000509258 HELZ2Q9BYK8 2649 aaKnown RBP11.14□□□□□ -0.63
RNF4-212ENST00000509258 CCP110O43303 1012 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 RNGTTO60942 597 aaKnown RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 LRIG2O94898 1065 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 PRLRP16471 622 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 CKMT2P17540 419 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 OR1E1P30953 314 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 CHRNA3P32297 505 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 PTPN9P43378 593 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 GSCP56915 257 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 SEMG2Q02383 582 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 GNA12Q03113 381 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 TARDBPQ13148 414 aaKnown RBP eCLIP11.13□□□□□ -0.63
RNF4-212ENST00000509258 KIF26BQ2KJY2 2108 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 SETMARQ53H47 684 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 FBXL19Q6PCT2 694 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 LRRC31Q6UY01 552 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 KANSL1Q7Z3B3 1105 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 SETD3Q86TU7 594 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 ATP11CQ8NB49 1132 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 MSANTD4Q8NCY6 345 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 CRELD1Q96HD1 420 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 AGPAT1Q99943 283 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 FUCA2Q9BTY2 467 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 ZYG11BQ9C0D3 744 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 FZD3Q9NPG1 666 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 ADAM22Q9P0K1 906 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 ZFR2Q9UPR6 939 aaKnown RBP11.13□□□□□ -0.63
RNF4-212ENST00000509258 AK5Q9Y6K8 562 aa11.13□□□□□ -0.63
RNF4-212ENST00000509258 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 PRAMEF26H0Y7S4 382 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 RRP8O43159 456 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 SPINT1O43278 529 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 KRT3P12035 628 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 GPD1P21695 349 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 SDC4P31431 198 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 EIF2S3P41091 472 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 RECQLP46063 649 aaPredicted RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 NRG1Q02297 640 aaPredicted RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 BNIP3Q12983 259 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 FGL2Q14314 439 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 RTP5Q14D33 572 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 SEL1L3Q68CR1 1132 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 NEK5Q6P3R8 708 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 ARFGAP1Q8N6T3 406 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 OR6K2Q8NGY2 324 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 ARHGEF2Q92974 986 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 TRIM7Q9C029 511 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 PREBQ9HCU5 417 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms