RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DAPK3O43293 454 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 BUB1O43683 1085 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 KDELR3O43731 214 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 SERPING1P05155 500 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CTSKP43235 329 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CCNHP51946 323 aaPredicted RBP19■□□□□ 0.63
UBE3D-207ENST00000509102 NEK3P51956 506 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 PPP2CBP62714 309 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 PPP2CAP67775 309 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 RAD51Q06609 339 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 ZNF423Q2M1K9 1284 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 E4F1Q66K89 784 aaPredicted RBP19■□□□□ 0.63
UBE3D-207ENST00000509102 FBXL19Q6PCT2 694 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 PLPP6Q8IY26 295 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 OXR1Q8N573 874 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CPLX3Q8WVH0 158 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 LRIG1Q96JA1 1093 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CNTNAP3BQ96NU0 1288 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CDC6Q99741 560 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 HDAC8Q9BY41 377 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 CNTNAP3Q9BZ76 1288 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 MAGEB5Q9BZ81 275 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 TM6SF2Q9BZW4 377 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 ZDHHC6Q9H6R6 413 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 IFNKQ9P0W0 207 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 MYO1AQ9UBC5 1043 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 HECAQ9UBI9 543 aaPredicted RBP19■□□□□ 0.63
UBE3D-207ENST00000509102 NEU3Q9UQ49 428 aa19■□□□□ 0.63
UBE3D-207ENST00000509102 TMEM191CA6NGB0 347 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 PRAMEF26H0Y7S4 382 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 RNGTTO60942 597 aaKnown RBP18.99■□□□□ 0.63
UBE3D-207ENST00000509102 PCDH8O95206 1070 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 GSRP00390 522 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 ITGB7P26010 798 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 GRK6P43250 576 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 ARRB1P49407 418 aaPredicted RBP18.99■□□□□ 0.63
UBE3D-207ENST00000509102 OGDHQ02218 1023 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 OVGP1Q12889 678 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 ERMARDQ5T6L9 678 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 PIP5KL1Q5T9C9 394 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 RHBDD1Q8TEB9 315 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 CAMK1GQ96NX5 476 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 OSBPL1AQ9BXW6 950 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 DHX35Q9H5Z1 703 aaKnown RBP18.99■□□□□ 0.63
UBE3D-207ENST00000509102 EBF2Q9HAK2 575 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 PCOLCE2Q9UKZ9 415 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 CAPN11Q9UMQ6 739 aa18.99■□□□□ 0.63
UBE3D-207ENST00000509102 APOBEC2Q9Y235 224 aaKnown RBP18.99■□□□□ 0.63
UBE3D-207ENST00000509102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.99■□□□□ 0.63
UBE3D-207ENST00000509102 WASH4PA8MWX3 477 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 H0Y8X5 98 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 TLR4O00206 839 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 EEF2KO00418 725 aaKnown RBP18.98■□□□□ 0.63
UBE3D-207ENST00000509102 CBFA2T2O43439 604 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 PCDHGA12O60330 932 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ZNF821O75541 412 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-207ENST00000509102 PBX1P40424 430 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ZNF135P52742 658 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ACAP1Q15027 740 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 NFKBIBQ15653 356 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 IQCHQ86VS3 1027 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 PSTKQ8IV42 348 aaKnown RBP18.98■□□□□ 0.63
UBE3D-207ENST00000509102 MFSD2AQ8NA29 543 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 OR2AP1Q8NGE2 309 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ARRDC3Q96B67 414 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 GDAP1L1Q96MZ0 367 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ELF4Q99607 663 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-207ENST00000509102 ISCUQ9H1K1 167 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 PCSK1NQ9UHG2 260 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 WASF2Q9Y6W5 498 aa18.98■□□□□ 0.63
UBE3D-207ENST00000509102 A0A1W2PQU0 124 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 RASA4BC9J798 803 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 KRIT1O00522 736 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 RASA4O43374 803 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 POP4O95707 220 aaKnown RBP18.97■□□□□ 0.63
UBE3D-207ENST00000509102 IGSF6O95976 241 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 AKT2P31751 481 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 INO80DQ53TQ3 878 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-207ENST00000509102 ZSCAN30Q86W11 494 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 HORMAD1Q86X24 394 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 UMODL1-AS1Q8N2C9 162 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 ARHGEF26Q96DR7 871 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 ARHGAP20Q9P2F6 1191 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 PLXNA2O75051 1894 aa18.97■□□□□ 0.63
UBE3D-207ENST00000509102 ACACBO00763 2458 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 A0A1B0GTQ1 180 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 A0A1W2PR77 199 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 PCNX2A6NKB5 2137 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 C10orf142B7Z368 130 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 NEMP1O14524 444 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 KCNK3O14649 394 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 TMCC1O94876 653 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 TPM1P09493 284 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 ADRB3P13945 408 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 MIPP30301 263 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 NDST2P52849 883 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 NXPH1P58417 271 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 TAS2R38P59533 333 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 RHOAP61586 193 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 RPS21P63220 83 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms