RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SERPINB2P05120 415 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CYP21A2P08686 494 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CYP11B2P19099 503 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CYP2F1P24903 491 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GJB2P29033 226 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DLSTP36957 453 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CLK3P49761 638 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 HNMTP50135 292 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GPC3P51654 580 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF445P59923 1031 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CLN3Q13286 438 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GPR176Q14439 515 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KCNJ12Q14500 433 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 LBRQ14739 615 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TXNRD1Q16881 649 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 Q6ZUG5 572 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 OTOAQ7RTW8 1153 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF610Q8N9Z0 462 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NXNL1Q96CM4 212 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MMP19Q99542 508 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CCSER1Q9C0I3 900 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BLZF1Q9H2G9 400 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KCNN2Q9H2S1 579 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MYO6Q9UM54 1294 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NPFFR2Q9Y5X5 522 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ADAMTSL1Q8N6G6 1762 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC22A31A6NKX4 558 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CFLARO15519 480 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DFNA5O60443 496 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 APOA1P02647 267 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CYP4B1P13584 511 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 STX2P32856 288 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC15A1P46059 708 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ECM1Q16610 540 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ME3Q16798 604 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 KRTCAP3Q53RY4 240 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FIP1L1Q6UN15 594 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MARVELD2Q8N4S9 558 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MEIOBQ8N635 442 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 B4GALNT2Q8NHY0 566 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC8CQ8TDW0 803 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ULK4Q96C45 1275 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MASTLQ96GX5 879 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 IFT27Q9BW83 186 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 RSAD1Q9HA92 442 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CCNB1IP1Q9NPC3 277 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ZCCHC3Q9NUD5 404 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PSME2Q9UL46 239 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 LTBP3Q9NS15 1303 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BAZ2AQ9UIF9 1905 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FAM171A2A8MVW0 826 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MATN4O95460 622 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CH25HO95992 272 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 HSMCR30P0CW71 290 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BMP1P13497 986 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 IL12RB1P42701 662 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC9C2Q5TAH2 1124 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 MLIPQ5VWP3 458 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DSG4Q86SJ6 1040 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NUDT13Q86X67 352 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CDK20Q8IZL9 346 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM58Q8NG06 486 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SLC26A7Q8TE54 656 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CNOT9Q92600 299 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FAM163AQ96GL9 167 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FAM84BQ96KN1 310 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SPATA13Q96N96 652 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PANX2Q96RD6 677 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 COA1Q9GZY4 146 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SMG9Q9H0W8 520 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TTYH1Q9H313 450 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TXLNGQ9NUQ3 528 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GIMAP4Q9NUV9 329 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 RAB20Q9NX57 234 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 GGA1Q9UJY5 639 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ADAM28Q9UKQ2 775 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 RAB21Q9UL25 225 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NAALAD2Q9Y3Q0 740 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CD3EAPO15446 510 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 EIF4EBP3O60516 100 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 NEMFO60524 1076 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 C6P13671 934 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 PLS3P13797 630 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 FOSL2P15408 326 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CCR10P46092 362 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SSX2Q16385 188 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 SEL1L2Q5TEA6 688 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CDKAL1Q5VV42 579 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM270Q6UE05 265 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 DPY19L4Q7Z388 723 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 TMC3Q7Z5M5 1100 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CDH26Q8IXH8 852 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 ELOA2Q8IYF1 753 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 CDC26Q8NHZ8 85 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 RBM18Q96H35 190 aaKnown RBP3.98□□□□□ -1.77
NEDD4-209ENST00000508871 OLFM1Q99784 485 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 BPIFA1Q9NP55 256 aa3.98□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC4BQ9NT99 713 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms