RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SIGLEC16A6NMB1 481 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 CCP110O43303 1012 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 PRLRP16471 622 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 RHOQP17081 205 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 GPD1P21695 349 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 NSFP46459 744 aaKnown RBP16.54■□□□□ 0.24
LMNA-222ENST00000508500 RXRGP48443 463 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 RPL7AP62424 266 aaKnown RBP16.54■□□□□ 0.24
LMNA-222ENST00000508500 TYRO3Q06418 890 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 SLC20A2Q08357 652 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 SCAPQ12770 1279 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 PPP1R15BQ5SWA1 713 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 ERN2Q76MJ5 926 aaKnown RBP16.54■□□□□ 0.24
LMNA-222ENST00000508500 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 TMEM145Q8NBT3 493 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 NTAN1Q96AB6 310 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 SKA1Q96BD8 255 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 CEP44Q9C0F1 390 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
LMNA-222ENST00000508500 ERVMER34-1Q9H9K5 563 aa16.54■□□□□ 0.24
LMNA-222ENST00000508500 PRAMEF26H0Y7S4 382 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 SLC31A1O15431 190 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 PRNPP04156 253 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 CALB1P05937 261 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 ITGAVP06756 1048 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 PLEKP08567 350 aaPredicted RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 GKP32189 559 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 CCNHP51946 323 aaPredicted RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 OGDHQ02218 1023 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 DNAJC3Q13217 504 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 ZNF284Q2VY69 593 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 ARL13BQ3SXY8 428 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 SETMARQ53H47 684 aaPredicted RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 CARD16Q5EG05 197 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 SEL1L3Q68CR1 1132 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 RETSATQ6NUM9 610 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 RWDD4Q6NW29 188 aaKnown RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 HORMAD1Q86X24 394 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 EID2Q8N6I1 236 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 BAP1Q92560 729 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 CCDC114Q96M63 670 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 MYOCQ99972 504 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 HDAC8Q9BY41 377 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 FZD3Q9NPG1 666 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 TAS2R14Q9NYV8 317 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 URB1O60287 2271 aaKnown RBP16.53■□□□□ 0.24
LMNA-222ENST00000508500 ASXL3Q9C0F0 2248 aa16.53■□□□□ 0.24
LMNA-222ENST00000508500 NUDT1P36639 197 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 CLDN6P56747 220 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 CAMK2BQ13554 666 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 FGL2Q14314 439 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 STAT4Q14765 748 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 ANO6Q4KMQ2 910 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 TMEM259Q4ZIN3 620 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 SLC45A4Q5BKX6 768 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 ANKRD20A12PQ8NF67 263 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 TBC1D31Q96DN5 1066 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 HEPHQ9BQS7 1158 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 TM6SF2Q9BZW4 377 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 KLC2Q9H0B6 622 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
LMNA-222ENST00000508500 FTSJ1Q9UET6 329 aa16.52■□□□□ 0.24
LMNA-222ENST00000508500 FAM149AA5PLN7 773 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 ENC1O14682 589 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 L1CAMP32004 1257 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 DNA2P51530 1060 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 ZNF143P52747 638 aaPredicted RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 CLDN2P57739 230 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 SMAD1Q15797 465 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 CCDC157Q569K6 752 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 E4F1Q66K89 784 aaPredicted RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 ACAD10Q6JQN1 1059 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 GCNT7Q6ZNI0 430 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 PARS2Q7L3T8 475 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 SLFN11Q7Z7L1 901 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 DNAAF5Q86Y56 855 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 NETO2Q8NC67 525 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 OR6K2Q8NGY2 324 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 MDM1Q8TC05 714 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 TSC1Q92574 1164 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 ISG20Q96AZ6 181 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 CNDP2Q96KP4 475 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 MCEEQ96PE7 176 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 MAGEH1Q9H213 219 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
LMNA-222ENST00000508500 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 FZD10Q9ULW2 581 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms