RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-225	ENST00000508476	ZBTB11	O95625	1053 aa	Predicted RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TFRC	P02786	760 aa	Known RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ENO3	P13929	434 aa	Predicted RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NAGA	P17050	411 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SKIV2L2	P42285	1042 aa	Known RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	KRTAP10-6	P60371	365 aa	Predicted RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ARHGAP8	P85298	464 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	BNC1	Q01954	994 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	DSC1	Q08554	894 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	KIF5A	Q12840	1032 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MORC3	Q14149	939 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	POSTN	Q15063	836 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	FBXO43	Q4G163	708 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NOL8	Q76FK4	1167 aa	Known RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NR2C2AP	Q86WQ0	139 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	PALB2	Q86YC2	1186 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MYCT1	Q8N699	235 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	OR14A16	Q8NHC5	309 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TMEM18	Q96B42	140 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RBM17	Q96I25	401 aa	Known RBP	4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NPFFR1	Q9GZQ6	430 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	CDT1	Q9H211	546 aa		4.9	□□□□□ -1.63
UBE2D3-225	ENST00000508476	OR6C68	A6NDL8	312 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SEPT4	O43236	478 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	FAM155B	O75949	473 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	METTL18	O95568	372 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	FCGR1A	P12314	374 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	AMT	P48728	403 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ART1	P52961	327 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	PLCB4	Q15147	1175 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	C9orf57	Q5W0N0	161 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NAPEPLD	Q6IQ20	393 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MON1B	Q7L1V2	547 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	C16orf82	Q7Z2V1	217 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SAMD3	Q8N6K7	520 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TEX45	Q8NA69	505 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SETD9	Q8NE22	299 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	LTV1	Q96GA3	475 aa	Predicted RBP	4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TWSG1	Q9GZX9	223 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SAYSD1	Q9NPB0	183 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	PLSCR4	Q9NRQ2	329 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	OCIAD1	Q9NX40	245 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	GRHL1	Q9NZI5	618 aa		4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SRPRB	Q9Y5M8	271 aa	Known RBP	4.89	□□□□□ -1.63
UBE2D3-225	ENST00000508476	LINC01553	A4QN01	128 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476		B9A039	149 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	STX16-NPEPL1	H3BU86	382 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	EYA2	O00167	538 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	STX16	O14662	325 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ASAP2	O43150	1006 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ITM2A	O43736	263 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	CKMT1A	P12532	417 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ADD2	P35612	726 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	GJC1	P36383	396 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	COMP	P49747	757 aa	Predicted RBP	4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	CTTN	Q14247	550 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	ME3	Q16798	604 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476		Q6ZTC4	211 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SUGP1	Q8IWZ8	645 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	OR4N2	Q8NGD1	307 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TMEM163	Q8TC26	289 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RNFT2	Q96EX2	444 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SLITRK1	Q96PX8	696 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MSTO1	Q9BUK6	570 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	WDR6	Q9NNW5	1121 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	IL36RN	Q9UBH0	155 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RIPOR2	Q9Y4F9	1068 aa		4.88	□□□□□ -1.63
UBE2D3-225	ENST00000508476	IGHV4-28	A0A0C4DH34	117 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	KDM4E	B2RXH2	506 aa	Predicted RBP	4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MMP3	P08254	477 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	DCTD	P32321	178 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RPE65	Q16518	533 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	CREB3L2	Q70SY1	520 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MOGAT3	Q86VF5	341 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RBFA	Q8N0V3	343 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	GALNT15	Q8N3T1	639 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RASSF8	Q8NHQ8	419 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	AFG1L	Q8WV93	481 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	THAP4	Q8WY91	577 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MASTL	Q96GX5	879 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	MVB12B	Q9H7P6	319 aa		4.87	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SRRM3	A6NNA2	597 aa	Predicted RBP	4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	BTBD18	B2RXH4	712 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	FAM157A	C9JC47	383 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SLC25A17	O43808	307 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	KCNJ13	O60928	360 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RXRA	P19793	462 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	YWHAQ	P27348	245 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	TRAPPC10	P48553	1259 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	AARS	P49588	968 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	GAS1	P54826	345 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	RPL36A	P83881	106 aa	Known RBP	4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	COASY	Q13057	564 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	PRKG1	Q13976	671 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	C10orf62	Q5T681	223 aa	Predicted RBP	4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	SPATA3	Q8NHX4	192 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	NCSTN	Q92542	709 aa		4.86	□□□□□ -1.63
UBE2D3-225	ENST00000508476	FIZ1	Q96SL8	496 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms