RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 A0A0A6YYJ9 748 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 FAM237AA0A1B0GTK4 181 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 OR6C75A6NL08 312 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 EIF3DO15371 548 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP54-206ENST00000508465 EXOC3O60645 756 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 NDUFA10O95299 355 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
NUP54-206ENST00000508465 TNNC2P02585 160 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 RHOP08100 348 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 HNRNPA1P09651 372 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP54-206ENST00000508465 TMEM191BP0C7N4 346 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 ODC1P11926 461 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 MYL4P12829 197 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 LAMP2P13473 410 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 CEBPBP17676 345 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 PTPN2P17706 415 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TNNI1P19237 187 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 LMO2P25791 158 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 CCR2P41597 374 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 AARSP49588 968 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP54-206ENST00000508465 TAF6P49848 677 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 CYP24A1Q07973 514 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 ADCY2Q08462 1091 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 GPR17Q13304 367 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TDGQ13569 410 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 SNRNP35Q16560 246 aaKnown RBP4.84□□□□□ -1.63
NUP54-206ENST00000508465 SLC5A9Q2M3M2 681 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 SOWAHAQ2M3V2 549 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
NUP54-206ENST00000508465 SLC39A12Q504Y0 691 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 SDHAF4Q5VUM1 108 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TPGS2Q68CL5 300 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 CENPPQ6IPU0 288 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 ZNF280DQ6N043 979 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 PARM1Q6UWI2 310 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 BHLHA9Q7RTU4 235 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 METTL23Q86XA0 190 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TCEAL8Q8IYN2 117 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 THEM5Q8N1Q8 247 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 PDCL2Q8N4E4 241 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 XXYLT1Q8NBI6 393 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 STKLD1Q8NE28 680 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 OR52N2Q8NGI0 321 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 FGF13Q92913 245 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 HPDLQ96IR7 371 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 HIST1H2AHQ96KK5 128 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TSPAN18Q96SJ8 248 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 HIST1H2AJQ99878 128 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 KXD1Q9BQD3 176 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 RHOBTB2Q9BYZ6 727 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 PLA2G2FQ9BZM2 168 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 KCTD10Q9H3F6 313 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 MAGEF1Q9HAY2 307 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 INTS13Q9NVM9 706 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 DMAC2Q9NW81 257 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 AFF4Q9UHB7 1163 aaKnown RBP4.84□□□□□ -1.63
NUP54-206ENST00000508465 USP25Q9UHP3 1055 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 L1RE1Q9UN81 338 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 C2CD2Q9Y426 696 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 INSL5Q9Y5Q6 135 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 SNX9Q9Y5X1 595 aa4.84□□□□□ -1.63
NUP54-206ENST00000508465 EPN1Q9Y6I3 576 aaPredicted RBP4.84□□□□□ -1.63
NUP54-206ENST00000508465 TCHHQ07283 1943 aa4.84□□□□□ -1.64
NUP54-206ENST00000508465 ARHGEF37A1IGU5 675 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 MYBPHLA2RUH7 354 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 ANHXE9PGG2 379 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 DVL2O14641 736 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 PI15O43692 258 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 HUS1O60921 280 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 MOSPD3O75425 235 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 C1RP00736 705 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 NR3C1P04150 777 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 ITGB6P18564 788 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 TYMPP19971 482 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 CYP2F1P24903 491 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 APOBEC3AP31941 199 aaPredicted RBP4.83□□□□□ -1.64
NUP54-206ENST00000508465 CXCR5P32302 372 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 VIPR2P41587 438 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 ALDH1A3P47895 512 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 GPR15P49685 360 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 VCPP55072 806 aaKnown RBP4.83□□□□□ -1.64
NUP54-206ENST00000508465 CDH8P55286 799 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 WNT3AP56704 352 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 MYL6P60660 151 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 PSMC1P62191 440 aaKnown RBP4.83□□□□□ -1.64
NUP54-206ENST00000508465 GPC5P78333 572 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 POU5F1Q01860 360 aaKnown RBP4.83□□□□□ -1.64
NUP54-206ENST00000508465 HTR4Q13639 388 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 MYBPC2Q14324 1141 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 PSMD6Q15008 389 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 BMT2Q1RMZ1 405 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 MGAT5BQ3V5L5 792 aa4.83□□□□□ -1.64
NUP54-206ENST00000508465 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
NUP54-206ENST00000508465 TANGO2Q6ICL3 276 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms