RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TRIM49P0CI25 452 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM49CP0CI26 452 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NPR3P17342 541 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CYP2A7P20853 494 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 AGXTP21549 392 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KELP23276 732 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CNR2P34972 360 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GPC1P35052 558 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MAPKAPK2P49137 400 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PEX5P50542 639 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 BNC1Q01954 994 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NR6A1Q15406 480 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 COBLL1Q53SF7 1204 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TAS1R1Q7RTX1 841 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 JAZF1Q86VZ6 243 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RELL1Q8IUW5 271 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PHYKPLQ8IUZ5 450 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GPR135Q8IZ08 494 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CHCHD4Q8N4Q1 142 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 OR9Q1Q8NGQ5 310 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SLC20A1Q8WUM9 679 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TFB1MQ8WVM0 346 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 USP6NLQ92738 828 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 C18orf8Q96DM3 657 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CLIP3Q96DZ5 547 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MCEEQ96PE7 176 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZBP1Q9H171 429 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 EPN3Q9H201 632 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KCNK12Q9HB15 430 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZFYVE1Q9HBF4 777 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FANCFQ9NPI8 374 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CNOT8Q9UFF9 292 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 ANAPC2Q9UJX6 822 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TMCC3Q9ULS5 477 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM98Q9Y2Y6 226 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CAB39Q9Y376 341 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 L3MBTL1Q9Y468 752 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PCDHGB3Q9Y5G1 929 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 THSD7BQ9C0I4 1608 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CEP250Q9BV73 2442 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ANO9A1A5B4 782 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 HEATR9A2RTY3 570 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 STX7O15400 261 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SLC31A1O15431 190 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TYRP14679 529 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 VIPR2P41587 438 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GRIA2P42262 883 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TUBP50607 506 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CLCN6P51797 869 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SLC5A3P53794 718 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 C1orf53Q5VUE5 145 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZCCHC8Q6NZY4 707 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 PARM1Q6UWI2 310 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ENPP7Q6UWV6 458 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 VSTM1Q6UX27 236 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RSPO2Q6UXX9 243 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 METTL16Q86W50 562 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 GALNT15Q8N3T1 639 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ATAD1Q8NBU5 361 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 NETO1Q8TDF5 533 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 HNRNPLLQ8WVV9 542 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 FGF13Q92913 245 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 UCN2Q96RP3 112 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 RHOBTB2Q9BYZ6 727 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FOXQ1Q9C009 403 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SEMA4AQ9H3S1 761 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 DPEP2Q9H4A9 486 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 Q9H521 79 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 GTF3C4Q9UKN8 822 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CARD8Q9Y2G2 431 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 POLR1DQ9Y2S0 133 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 HBS1LQ9Y450 684 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 PRRC2BQ5JSZ5 2229 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 RBAK-RBAKDNI3L0D1 243 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FOXN3O00409 490 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SCAMP1O15126 338 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ASLP04424 464 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 S100A6P06703 90 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MLNP12872 115 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TYMPP19971 482 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PTPN3P26045 913 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MRPS15P82914 257 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 MORF4L2Q15014 288 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ARSIQ5FYB1 569 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 FAAH2Q6GMR7 532 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 KRT80Q6KB66 452 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 SLFN11Q7Z7L1 901 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 MMAAQ8IVH4 418 aaKnown RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 SLC39A11Q8N1S5 342 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 IL22RA1Q8N6P7 574 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ZBTB8BQ8NAP8 495 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 POMGNT2Q8NAT1 580 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 ITFG1Q8TB96 612 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 CHFRQ96EP1 664 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 DMRTB1Q96MA1 342 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 PPM1MQ96MI6 270 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 INPP4AQ96PE3 977 aaPredicted RBP3□□□□□ -1.93
NEDD4-208ENST00000508342 IER2Q9BTL4 223 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM60Q9H2L4 133 aa3□□□□□ -1.93
NEDD4-208ENST00000508342 VPS45Q9NRW7 570 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms