RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 NPAS2Q99743 824 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 RHOJQ9H4E5 214 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 WDCPQ9H6R7 721 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 TRHDEQ9UKU6 1024 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 CDYLQ9Y232 598 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 FIS1Q9Y3D6 152 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 VAPBO95292 243 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 PGK1P00558 417 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 HOXD8P13378 290 aaPredicted RBP21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 NSUN2Q08J23 767 aaKnown RBP eCLIP21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 ZNF280DQ6N043 979 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 LRRC8EQ6NSJ5 796 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 LILRA2Q8N149 483 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 ARHGAP18Q8N392 663 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 SERPINI1Q99574 410 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 DNAI2Q9GZS0 605 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 PRPF19Q9UMS4 504 aaKnown RBP21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 AK5Q9Y6K8 562 aa21.8■■□□□ 1.08
TSPAN17-207ENST00000508164 PEX1O43933 1283 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 CABYRO75952 493 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 DDHD2O94830 711 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 PMLP29590 882 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 PRKAA1Q13131 559 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 ESRP1Q6NXG1 681 aaKnown RBP21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 FAM35AQ86V20 835 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 STYXQ8WUJ0 223 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 TMA16Q96EY4 203 aaKnown RBP21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 CCDC28BQ9BUN5 200 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 ZNF385DQ9H6B1 395 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 WDR41Q9HAD4 459 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 SLC2A6Q9UGQ3 507 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 MYOCOSA0A1B0GUC4 107 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 DFFAO00273 331 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 GABRDO14764 452 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 DNAJA2O60884 412 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 PIM1P11309 404 aaPredicted RBP21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 SLC12A1Q13621 1099 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 TSTD2Q5T7W7 516 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 RWDD4Q6NW29 188 aaKnown RBP21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 PNPLA1Q8N8W4 532 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 IPMKQ8NFU5 416 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 MAML3Q96JK9 1138 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 SENP8Q96LD8 212 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 LRGUKQ96M69 825 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 CLIC5Q9NZA1 410 aa21.79■■□□□ 1.08
TSPAN17-207ENST00000508164 SMIM35A0A1B0GVV1 85 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 NEMP2A6NFY4 417 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 TARM1B6A8C7 271 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 PDHXO00330 501 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 PABPC4LP0CB38 370 aaKnown RBP21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 CNGA3Q16281 694 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 ARL13BQ3SXY8 428 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 TWF2Q6IBS0 349 aaKnown RBP21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 NAPEPLDQ6IQ20 393 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 BTBD9Q96Q07 612 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 KIFC1Q9BW19 673 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 SIK2Q9H0K1 926 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 C6orf203Q9P0P8 240 aaPredicted RBP21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 COPG1Q9Y678 874 aaKnown RBP21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 APOA4P06727 396 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 SPATA31D3P0C874 917 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 SMIM18P0DKX4 95 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 HCAR3P49019 387 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 SPATA31D4Q6ZUB0 917 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 ATXN3LQ9H3M9 355 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 DMAP1Q9NPF5 467 aaPredicted RBP21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 MID2Q9UJV3 735 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 ANKRD6Q9Y2G4 727 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 ACOT9Q9Y305 439 aa21.78■■□□□ 1.08
TSPAN17-207ENST00000508164 ART3Q13508 389 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 RPS27LQ71UM5 84 aaKnown RBP21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 BHLHA9Q7RTU4 235 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 GALNT4Q8N4A0 578 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 CPSF7Q8N684 471 aaKnown RBP21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 NAT14Q8WUY8 206 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 NCSTNQ92542 709 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 DPF3Q92784 378 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 RNF34Q969K3 372 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 CNBD2Q96M20 576 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 KLHL32Q96NJ5 620 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 GPR78Q96P69 363 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 EPAS1Q99814 870 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 PKP2Q99959 881 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 ZBTB26Q9HCK0 441 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 RIMS3Q9UJD0 308 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 RAD54BQ9Y620 910 aa21.77■■□□□ 1.08
TSPAN17-207ENST00000508164 MTSS1O43312 755 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 CRTAMO95727 393 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 HNRNPLP14866 589 aaKnown RBP eCLIP21.77■■□□□ 1.078e-8■□□□□ 10.5
TSPAN17-207ENST00000508164 AIF1P55008 147 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 PRPSAP1Q14558 356 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 R3HDM1Q15032 1099 aaKnown RBP21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 RDH11Q8TC12 318 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 NMD3Q96D46 503 aaKnown RBP21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 SGIP1Q9BQI5 828 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 TINF2Q9BSI4 451 aa21.77■■□□□ 1.07
TSPAN17-207ENST00000508164 FAM95CA0A1B0GW59 222 aa21.76■■□□□ 1.07
TSPAN17-207ENST00000508164 MBLAC1A4D2B0 266 aaPredicted RBP21.76■■□□□ 1.07
TSPAN17-207ENST00000508164 ARNTP27540 789 aa21.76■■□□□ 1.07
TSPAN17-207ENST00000508164 ADGRE1Q14246 886 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms