RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 IDH3AP50213 366 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 KLC1Q07866 573 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 ZNF789Q5FWF6 425 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 TMEM154Q6P9G4 183 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 RSPO2Q6UXX9 243 aaPredicted RBP14.71□□□□□ -0.06
DDX41-208ENST00000507955 WDR75Q8IWA0 830 aaKnown RBP14.71□□□□□ -0.06
DDX41-208ENST00000507955 PHC3Q8NDX5 983 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 MAPK15Q8TD08 544 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 KCTD4Q8WVF5 259 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 PABPC5Q96DU9 382 aaKnown RBP14.71□□□□□ -0.06
DDX41-208ENST00000507955 OMDQ99983 421 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 TASP1Q9H6P5 420 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 RGS18Q9NS28 235 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.06
DDX41-208ENST00000507955 STX18Q9P2W9 335 aaKnown RBP14.71□□□□□ -0.06
DDX41-208ENST00000507955 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.06
DDX41-208ENST00000507955 LOC100653049A0A140TA62 436 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 EME2A4GXA9 379 aaPredicted RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 ENO4A6NNW6 628 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 ERI2A8K979 691 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 KRT34O76011 436 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 MAGEA12P43365 314 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 RAP1GDS1P52306 607 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 ABCE1P61221 599 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 MRPS35P82673 323 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 SLC10A7Q0GE19 358 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 USP10Q14694 798 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 VARS2Q5ST30 1063 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 FAM171A1Q5VUB5 890 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 SLC24A5Q71RS6 500 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 ZC3HC1Q86WB0 502 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 EFCAB3Q8N7B9 438 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 MRGPRX2Q96LB1 330 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 PANX3Q96QZ0 392 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 FSD1LQ9BXM9 530 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 NMRAL1Q9HBL8 299 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 PCDHB8Q9UN66 801 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 MYO16Q9Y6X6 1858 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 GOLGA8QA0A0J9YX86 632 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 GOLGA8OA6NCC3 632 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 GOLGA8NF8WBI6 632 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 ZNF195O14628 629 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 SBK3P0C264 359 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 NCF2P19878 526 aaPredicted RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 ETFBP38117 255 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 MLLT6P55198 1093 aaPredicted RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 SLC25A3Q00325 362 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 DSC1Q08554 894 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 NAB1Q13506 487 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 SGF29Q96ES7 293 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 HMCESQ96FZ2 354 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 IL12RB2Q99665 862 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 MCMBPQ9BTE3 642 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 THTPAQ9BU02 230 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 KIFC1Q9BW19 673 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 ZCWPW1Q9H0M4 648 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 NT5MQ9NPB1 228 aa14.7□□□□□ -0.06
DDX41-208ENST00000507955 MTF2Q9Y483 593 aaPredicted RBP14.7□□□□□ -0.06
DDX41-208ENST00000507955 TET1Q8NFU7 2136 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 CAPN15O75808 1086 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 SP100P23497 879 aaPredicted RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 MXRA7P84157 204 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 SLC9B1Q4ZJI4 515 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 STXBP5Q5T5C0 1151 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 PKN3Q6P5Z2 889 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 CLEC14AQ86T13 490 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 PHTF2Q8N3S3 785 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 PCSK9Q8NBP7 692 aaKnown RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 RAB3IL1Q8TBN0 382 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 IGSF8Q969P0 613 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 TSGA13Q96PP4 275 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 NDNQ99608 321 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 CATSPERBQ9H7T0 1116 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 DLGAP2Q9P1A6 1054 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RUVBL2Q9Y230 463 aaKnown RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 ACTL7AQ9Y615 435 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 E9PBE3 544 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 KLHL41O60662 606 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 SIN3BO75182 1162 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 SERPINA6P08185 405 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 TYMPP19971 482 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 CTXN3Q4LDR2 81 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RALGPS1Q5JS13 557 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RAP1GAP2Q684P5 730 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RIPOR1Q6ZS17 1223 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RNF180Q86T96 592 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 TMEM173Q86WV6 379 aaPredicted RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 TMEM151AQ8N4L1 468 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 RTL3Q8N8U3 475 aaKnown RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 PPP4R1Q8TF05 950 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 ZNF483Q8TF39 744 aaPredicted RBP14.69□□□□□ -0.06
DDX41-208ENST00000507955 STMN2Q93045 179 aa14.69□□□□□ -0.06
DDX41-208ENST00000507955 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms