RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CAPN6Q9Y6Q1 641 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 TRPM6Q9BX84 2022 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 EML5Q05BV3 1969 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 FAM186AA6NE01 2351 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TSPAN11A1L157 253 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 BCLAF3A2AJT9 711 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GOLGA6CA6NDK9 693 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GOLGA6BA6NDN3 693 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 SGK1O00141 431 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TOR1BO14657 336 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 NDC80O14777 642 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CST8O60676 142 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RNGTTO60942 597 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RHOBTB1O94844 696 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TMCC1O94876 653 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 EPOP01588 193 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 DNTTP04053 509 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GOLGA6DP0CG33 693 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TCF4P15884 667 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ITGB7P26010 798 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 IRAK1P51617 712 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 KLF1Q13351 362 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ZNF235Q14590 738 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 LBRQ14739 615 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 PRKD1Q15139 912 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 NOMO1Q15155 1222 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ANGPT1Q15389 498 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 MAP7D1Q3KQU3 841 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 SLC45A4Q5BKX6 768 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CIR1Q86X95 450 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RFX6Q8HWS3 928 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TMPRSS6Q8IU80 811 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CDKL3Q8IVW4 592 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CCDC13Q8IYE1 715 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 OR7D4Q8NG98 312 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ACTRT1Q8TDG2 376 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TFB1MQ8WVM0 346 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GAB3Q8WWW8 586 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ASB12Q8WXK4 309 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 SIPA1Q96FS4 1042 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 MRGPRX1Q96LB2 322 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 DCBLD2Q96PD2 775 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 IL12RB2Q99665 862 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 SPON2Q9BUD6 331 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 CINPQ9BW66 212 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 SLC39A8Q9C0K1 460 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RAB6CQ9H0N0 254 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 PREBQ9HCU5 417 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 DYRK4Q9NR20 520 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 TMPRSS4Q9NRS4 437 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GPATCH2LQ9NWQ4 482 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GOLGA6AQ9NYA3 693 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 IL36AQ9UHA7 158 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 PPM1HQ9ULR3 514 aa8.6□□□□□ -1.03
PDGFC-205ENST00000506880 RIF1Q5UIP0 2472 aaKnown RBP8.6□□□□□ -1.03
PDGFC-205ENST00000506880 GOLGA6L10A0A0M3HER8 536 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CTAGE9A4FU28 777 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ERI2A8K979 691 aaKnown RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 H0Y858 1186 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 AP3B1O00203 1094 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PSMD3O43242 534 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PI15O43692 258 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 MFSD11O43934 449 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 OPHN1O60890 802 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 NEBLO76041 1014 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CD160O95971 181 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PDGFBP01127 241 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 SP9P0CG40 484 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CCNB1P14635 433 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CR2P20023 1033 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PRKCHP24723 683 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 SERPINA4P29622 427 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CHRNA3P32297 505 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ACVRL1P37023 503 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 GGCXP38435 758 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 P2RY2P41231 377 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 NBL1P41271 181 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 MMP13P45452 471 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 COPAP53621 1224 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 RHOAP61586 193 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 SATB1Q01826 763 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ELP6Q0PNE2 266 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 MESP2Q0VG99 397 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ELF2Q15723 593 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CST6Q15828 149 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CCNG2Q16589 344 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 MYLK3Q32MK0 819 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ATP13A4Q4VNC1 1196 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 TEX44Q53QW1 395 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ZNF805Q5CZA5 627 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CCDC181Q5TID7 509 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PAPD7Q5XG87 772 aaKnown RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms