RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 LRCH4O75427 683 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ZNF821O75541 412 aaPredicted RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 GJB3O75712 270 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 CD160O95971 181 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 FAM228BP0C875 321 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 CD59P13987 128 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 NUDT1P36639 197 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 SNRPD1P62314 119 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 BNC1Q01954 994 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ACAP1Q15027 740 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 KIF19Q2TAC6 998 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 SLC45A4Q5BKX6 768 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PPP6R3Q5H9R7 873 aaPredicted RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 CCDC122Q5T0U0 273 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ALKBH5Q6P6C2 394 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 LAYNQ6UX15 382 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ERN2Q76MJ5 926 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PIP4P1Q86T03 277 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PSTKQ8IV42 348 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PLPP6Q8IY26 295 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 UMODL1-AS1Q8N2C9 162 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ARFGAP1Q8N6T3 406 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 CASKIN2Q8WXE0 1202 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ARRDC3Q96B67 414 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 HMCESQ96FZ2 354 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ORAI3Q9BRQ5 295 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 THAP2Q9H0W7 228 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 EBF2Q9HAK2 575 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
CLDND1-211ENST00000506575 SNX11Q9Y5W9 270 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 WASF2Q9Y6W5 498 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 PCNX2A6NKB5 2137 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 TMEM131Q92545 1883 aa15.86■□□□□ 0.13
CLDND1-211ENST00000506575 CEP295Q9C0D2 2601 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 CABIN1Q9Y6J0 2220 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 VILLO15195 856 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 LATO43561 262 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 GSRP00390 522 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 ZNF883P0CG24 379 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 CD38P28907 300 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 MAT2AP31153 395 aaKnown RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 PCK1P35558 622 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 NEK3P51956 506 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 ZNF135P52742 658 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 SERINC3Q13530 473 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 HNRNPDQ14103 355 aaKnown RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 PIGHQ14442 188 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 CA9Q16790 459 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 SETMARQ53H47 684 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 PIP5KL1Q5T9C9 394 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 FBXL19Q6PCT2 694 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 TRIM69Q86WT6 500 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 OR2AP1Q8NGE2 309 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 OR8K1Q8NGG5 319 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 KCTD15Q96SI1 283 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-211ENST00000506575 NUP85Q9BW27 656 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 HDAC8Q9BY41 377 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 DEF6Q9H4E7 631 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 IL21RQ9HBE5 538 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 TM7SF3Q9NS93 570 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 ARHGAP20Q9P2F6 1191 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 IP6K2Q9UHH9 426 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 DMTF1Q9Y222 760 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 PCDHB9Q9Y5E1 797 aa15.85■□□□□ 0.13
CLDND1-211ENST00000506575 ARHGAP42A6NI28 874 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 KRIT1O00522 736 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 SH3BP5O60239 455 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 RNGTTO60942 597 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 TMCC1O94876 653 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 PCDH8O95206 1070 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 POP4O95707 220 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 ITGB7P26010 798 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 HNRNPH3P31942 346 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 EIF4A3P38919 411 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 NDST2P52849 883 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 RHOAP61586 193 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 RAD51Q06609 339 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 SUZ12Q15022 739 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 INO80DQ53TQ3 878 aaPredicted RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 NAPEPLDQ6IQ20 393 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 NEK5Q6P3R8 708 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 RFX8Q6ZV50 586 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 VSTM4Q8IW00 320 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 NAXDQ8IW45 347 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 OR6K2Q8NGY2 324 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 SETD7Q8WTS6 366 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 LRIG1Q96JA1 1093 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 GDAP1L1Q96MZ0 367 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 KLC2Q9H0B6 622 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 ZWILCHQ9H900 591 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 ANAPC7Q9UJX3 599 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 FNDC3AQ9Y2H6 1198 aaKnown RBP15.84■□□□□ 0.13
CLDND1-211ENST00000506575 CHD8Q9HCK8 2581 aa15.84■□□□□ 0.13
CLDND1-211ENST00000506575 DOCK9Q9BZ29 2069 aa15.83■□□□□ 0.13
CLDND1-211ENST00000506575 C10orf142B7Z368 130 aa15.83■□□□□ 0.12
CLDND1-211ENST00000506575 DFNA5O60443 496 aa15.83■□□□□ 0.12
CLDND1-211ENST00000506575 IGSF6O95976 241 aa15.83■□□□□ 0.12
CLDND1-211ENST00000506575 CYP1A2P05177 515 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms