RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SLC26A9Q7LBE3 791 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TAS1R1Q7RTX1 841 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 DENND1CQ8IV53 801 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ARHGAP12Q8IWW6 846 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 IFT20Q8IY31 132 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UNC5BQ8IZJ1 945 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UTP4Q969X6 686 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SIGLEC10Q96LC7 697 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 DHRS1Q96LJ7 313 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SNRNP25Q9BV90 132 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 MAGEH1Q9H213 219 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 DTLQ9NZJ0 730 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 PPARGC1AQ9UBK2 798 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF281Q9Y2X9 895 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 DOCK6Q96HP0 2047 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 YJEFN3A6XGL0 299 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 B4E171 279 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 E7ENQ6 273 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TTC4O95801 387 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TOP3BO95985 862 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 F7P08709 466 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 FLT3LGP49771 235 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 IKBKEQ14164 716 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PDCD2Q16342 344 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 DGKKQ5KSL6 1271 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 AGBL2Q5U5Z8 902 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 FAM205BPQ63HN1 556 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TMEM150AQ86TG1 271 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 C11orf74Q86VG3 221 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TDRPQ86YL5 185 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 COLGALT2Q8IYK4 626 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 CACNA2D3Q8IZS8 1091 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 OR52K2Q8NGK3 314 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 RXFP2Q8WXD0 754 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SH3KBP1Q96B97 665 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MVB12AQ96EY5 273 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PCED1BQ96HM7 432 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 RCC1LQ96I51 464 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PRMT1Q99873 361 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ADAM19Q9H013 955 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GPATCH2LQ9NWQ4 482 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SLC17A6Q9P2U8 582 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 USP18Q9UMW8 372 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SNX10Q9Y5X0 201 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 KPNA7A9QM74 516 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 H3BML4 177 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 NDUFS2O75306 463 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GJB3O75712 270 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GRAP2O75791 330 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 KRT37O76014 449 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SCG5P05408 212 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MMP2P08253 660 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 CYP2B6P20813 491 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 AGXTP21549 392 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 XPAP23025 273 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MAGEA12P43365 314 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MRPS6P82932 125 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 OTUD4Q01804 1114 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PFKPQ01813 784 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SLC6A3Q01959 620 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SCAPQ12770 1279 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 RASA2Q15283 850 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TRIP13Q15645 432 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 DPY19L1Q2PZI1 675 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GOLGA7BQ2TAP0 167 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ANKRD20A8PQ5CZ79 823 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 USP45Q70EL2 814 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 RHOT1Q8IXI2 618 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PRR18Q8N4B5 295 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ANKRD52Q8NB46 1076 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SHKBP1Q8TBC3 707 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 CENPTQ96BT3 561 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 CASD1Q96PB1 797 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 RNF157Q96PX1 679 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GAS2L1Q99501 681 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TRIT1Q9H3H1 467 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PRDM12Q9H4Q4 367 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 AZI2Q9H6S1 392 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 DNAJC28Q9NX36 388 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 DNAJB4Q9UDY4 337 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ZHX1Q9UKY1 873 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 NUP210Q8TEM1 1887 aaPredicted RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ATXN2Q99700 1313 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 KCNU1A8MYU2 1149 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 SEPT4O43236 478 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PLOD3O60568 738 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 PPM1BO75688 479 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 TUBBP07437 444 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 FAM157BP0CG42 384 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 T-ENOLP0DO92 83 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 HTR1BP28222 390 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 ACTN2P35609 894 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MLH1P40692 756 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 MDH1P40925 334 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 YWHAEP62258 255 aaKnown RBP6.06□□□□□ -1.44
SCLT1-207ENST00000506233 GSTM4Q03013 218 aa6.06□□□□□ -1.44
SCLT1-207ENST00000506233 DCAF4L1Q3SXM0 396 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms