RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PRLRP16471 622 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 PRKCIP41743 596 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 CLCN6P51797 869 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 MAMLD1Q13495 774 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 FGL2Q14314 439 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 TEAD4Q15561 434 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 ASIC2Q16515 512 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 SEL1L3Q68CR1 1132 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 TRIM69Q86WT6 500 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 PROSER1Q86XN7 944 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 TMIEQ8NEW7 156 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 AIPL1Q9NZN9 384 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 IL36AQ9UHA7 158 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 MYO6Q9UM54 1294 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 GPSM3Q9Y4H4 160 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 NBEAQ8NFP9 2946 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 A0A1W2PQC6 194 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 SLC7A4O43246 635 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 RNGTTO60942 597 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 ABL2P42684 1182 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 MAPKAPK2P49137 400 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 NXPH1P58417 271 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 BNIP3Q12983 259 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 CARD16Q5EG05 197 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 ATXN7L2Q5T6C5 722 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 FAM46CQ5VWP2 391 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 HGSNATQ68CP4 663 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 NAPEPLDQ6IQ20 393 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 C19orf48Q6RUI8 117 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 PARS2Q7L3T8 475 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 DSG4Q86SJ6 1040 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 GLRX5Q86SX6 157 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 CNPY3Q9BT09 278 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 PCDHGB2Q9Y5G2 931 aa17.05■□□□□ 0.32
PDLIM7-215ENST00000506161 SETXQ7Z333 2677 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 A0A1W2PQU0 124 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 SLC31A1O15431 190 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 FLRT2O43155 660 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 CREB3O43889 395 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 DKK1O94907 266 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 TCF4P15884 667 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 L1CAMP32004 1257 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 CCT8P50990 548 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 DNA2P51530 1060 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 CLDN6P56747 220 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 FANCCQ00597 558 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 ZNF284Q2VY69 593 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 ACBD5Q5T8D3 534 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 RTL3Q8N8U3 475 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 TMEM145Q8NBT3 493 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 RHBDD1Q8TEB9 315 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 HMCESQ96FZ2 354 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 ELF4Q99607 663 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 KDM4CQ9H3R0 1056 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 ZDHHC6Q9H6R6 413 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 ITM2BQ9Y287 266 aa17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-215ENST00000506161 TMEM191CA6NGB0 347 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 GOLGA8CPA6NN73 597 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 TLR4O00206 839 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 RAD51BO15315 384 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 PCDHGA12O60330 932 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 RAMP2O60895 175 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 TRIM16O95361 564 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 ITIH2P19823 946 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 EPHB2P29323 1055 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 C21orf59P57076 290 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 CLDN2P57739 230 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 SFSWAPQ12872 951 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 SFMBT2Q5VUG0 894 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 ERN2Q76MJ5 926 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 TP53INP2Q8IXH6 220 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 SAP25Q8TEE9 199 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 ADAMTS14Q8WXS8 1223 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 HEPHQ9BQS7 1158 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 SNRNP25Q9BV90 132 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 MAGEH1Q9H213 219 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 LHX3Q9UBR4 397 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 MFHAS1Q9Y4C4 1052 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms