RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CNTN5O94779 1100 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 MT-CO1P00395 513 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 CTSLP07711 333 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 LSSP48449 732 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 THOP1P52888 689 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 TLE3Q04726 772 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 RAPGEF1Q13905 1077 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 ALFQ53S48 1182 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 CARD16Q5EG05 197 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 C14orf80Q86SX3 495 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 SLC47A2Q86VL8 602 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 SPACA3Q8IXA5 215 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 DENND6BQ8NEG7 585 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 OR52K2Q8NGK3 314 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 KCNE4Q8WWG9 221 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 ISG20Q96AZ6 181 aaKnown RBP21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 ARRDC3Q96B67 414 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 CRELD1Q96HD1 420 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 PSMB7Q99436 277 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 OSBPL1AQ9BXW6 950 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 TNKS2Q9H2K2 1166 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 FZD3Q9NPG1 666 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 KIAA1468Q9P260 1216 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 CA5BQ9Y2D0 317 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 IGLV3-10A0A075B6K4 115 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 TOR1BO14657 336 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 CSO75390 466 aaKnown RBP21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 IRAK1P51617 712 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 SNRPD1P62314 119 aaKnown RBP21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 TMEM259Q4ZIN3 620 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 LINGO4Q6UY18 593 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 GCNT7Q6ZNI0 430 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 DPY19L3Q6ZPD9 716 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 PLPP6Q8IY26 295 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 IFI44Q8TCB0 444 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 NAT6Q93015 286 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 NT5C3BQ969T7 300 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 WBP1Q96G27 269 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 UCKL1Q9NWZ5 548 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 PPARGC1AQ9UBK2 798 aaKnown RBP21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 SPASTQ9UBP0 616 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 SALL4Q9UJQ4 1053 aa21.44■■□□□ 1.02
SQSTM1-210ENST00000506042 SPTY2D1-AS1A0A0U1RR47 76 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 TPP1O14773 563 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 CSF2P04141 144 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 TPM2P07951 284 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 NME1P15531 152 aaKnown RBP21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 DESP17661 470 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 GABRB2P47870 512 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 CCNHP51946 323 aaPredicted RBP21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 GNA12Q03113 381 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 ARCQ7LC44 396 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 FAM71AQ8IYT1 594 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 SCG3Q8WXD2 468 aaKnown RBP21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 ASB12Q8WXK4 309 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 LENG8Q96PV6 779 aaPredicted RBP21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 TBCBQ99426 244 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 ZDHHC6Q9H6R6 413 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 MPP6Q9NZW5 540 aa21.43■■□□□ 1.02
SQSTM1-210ENST00000506042 A0A0D9SEW6 157 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 ZSCAN5CA6NGD5 496 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 K7ERQ8 282 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 K7ESM1 405 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 FOXN3O00409 490 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 AQP9O43315 295 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 SMAD6O43541 496 aaKnown RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 TCEA3O75764 348 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 ENDOD1O94919 500 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 PAK4O96013 591 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 CDH5P33151 784 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 MLLT3P42568 568 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 MAPKAPK2P49137 400 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 CLDN2P57739 230 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 NR0B2Q15466 257 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 CDCP2Q5VXM1 449 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 SEL1L3Q68CR1 1132 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 ARL14Q8N4G2 192 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 CHST14Q8NCH0 376 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 ZNF548Q8NEK5 533 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 SLC13A1Q9BZW2 595 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 NDST4Q9H3R1 872 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 HECAQ9UBI9 543 aaPredicted RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 ZFR2Q9UPR6 939 aaKnown RBP21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 IGSF10Q6WRI0 2623 aa21.42■■□□□ 1.02
SQSTM1-210ENST00000506042 MPOP05164 745 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 CYP11B1P15538 503 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 JUNDP17535 347 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 CLCN1P35523 988 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 BLKP51451 505 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 CFHR1Q03591 330 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 PDE1CQ14123 709 aaPredicted RBP21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 ESRP1Q6NXG1 681 aaKnown RBP21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 RBM44Q6ZP01 1051 aaKnown RBP21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 ZNF677Q86XU0 584 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 DRC7Q8IY82 874 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 OR7D4Q8NG98 312 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 DOLKQ9UPQ8 538 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 RAI2Q9Y5P3 530 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 FADS3Q9Y5Q0 445 aa21.41■■□□□ 1.02
SQSTM1-210ENST00000506042 WASF2Q9Y6W5 498 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms