RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 CHST14Q8NCH0 376 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 BTN2A2Q8WVV5 523 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 GLMNQ92990 594 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 RAB7BQ96AH8 199 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 ISG20Q96AZ6 181 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 BBC3Q96PG8 261 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 TBCBQ99426 244 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 LGMNQ99538 433 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 TNKS2Q9H2K2 1166 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 NDST4Q9H3R1 872 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 PPARGC1AQ9UBK2 798 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 DACH1Q9UI36 760 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 CSNK1G3Q9Y6M4 447 aa11.34□□□□□ -0.59
UBE2D3-219ENST00000505207 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ENDOD1O94919 500 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 PAK4O96013 591 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ADRB3P13945 408 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 CYP11B1P15538 503 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 RPIAP49247 311 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 SERPINH1P50454 418 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 PCBP4P57723 403 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 CLDN2P57739 230 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 APBA1Q02410 837 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 GNA12Q03113 381 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 CCDC173Q0VFZ6 552 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 PTK2BQ14289 1009 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 DRAP1Q14919 205 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 CAMK4Q16566 473 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 TMEM259Q4ZIN3 620 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 VWA3BQ502W6 1294 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ZCCHC8Q6NZY4 707 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 IRF2BP1Q8IU81 584 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ZNF683Q8IZ20 524 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 RYBPQ8N488 228 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 OR7D4Q8NG98 312 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ASB12Q8WXK4 309 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 APOLD1Q96LR9 279 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 LENG8Q96PV6 779 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 C1QTNF7Q9BXJ2 289 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 SIX2Q9NPC8 291 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 FZD3Q9NPG1 666 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 PLCB1Q9NQ66 1216 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 UCKL1Q9NWZ5 548 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 ZFR2Q9UPR6 939 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 FADS3Q9Y5Q0 445 aa11.33□□□□□ -0.6
UBE2D3-219ENST00000505207 SPTY2D1-AS1A0A0U1RR47 76 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 GOLGA8SH3BPF8 625 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 K7ESM1 405 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 USP12O75317 370 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 POP4O95707 220 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 CSF2P04141 144 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 LSSP48449 732 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 MAPKAPK2P49137 400 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 CCNHP51946 323 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 RAD51Q06609 339 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 OTUD1Q5VV17 481 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 CDCP2Q5VXM1 449 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 SEL1L3Q68CR1 1132 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 PARGQ86W56 976 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 ZNF677Q86XU0 584 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 XYLT1Q86Y38 959 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 DENND6BQ8NEG7 585 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 WDR48Q8TAF3 677 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 MAPK15Q8TD08 544 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 CRELD1Q96HD1 420 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 IL12RB2Q99665 862 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 POLR1BQ9H9Y6 1135 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 THSD1Q9NS62 852 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 RAI2Q9Y5P3 530 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 SNX10Q9Y5X0 201 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 WASF2Q9Y6W5 498 aa11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 TP53BP1Q12888 1972 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-219ENST00000505207 LAMA5O15230 3695 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 ZSCAN5CA6NGD5 496 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 TOR1BO14657 336 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 TPP1O14773 563 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 ZMPSTE24O75844 475 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 TPM2P07951 284 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 NME1P15531 152 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 JUNDP17535 347 aa11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 TFE3P19532 575 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-219ENST00000505207 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms