RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CDH18Q13634 790 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TGIF1Q15583 401 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 IGFBP7Q16270 282 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 NFIL3Q16649 462 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PERM1Q5SV97 790 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TTC39BQ5VTQ0 682 aaPredicted RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 NADSYN1Q6IA69 706 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 KIAA1161Q6NSJ0 714 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 RFWD3Q6PCD5 774 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 ATCAYQ86WG3 371 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SLC35F3Q8IY50 421 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 CCDC116Q8IYX3 515 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 DENND6BQ8NEG7 585 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 NANOS1Q8WY41 292 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 ARRDC3Q96B67 414 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 ALG14Q96F25 216 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 FEM1CQ96JP0 617 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 IL12RB2Q99665 862 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 CCDC3Q9BQI4 270 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SLC17A9Q9BYT1 436 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 ULBP1Q9BZM6 244 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 IMPG2Q9BZV3 1241 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 NIF3L1Q9GZT8 377 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 DNAJC28Q9NX36 388 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SFMBT1Q9UHJ3 866 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 KLF15Q9UIH9 416 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 APPL1Q9UKG1 709 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PADI4Q9UM07 663 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 ZFR2Q9UPR6 939 aaKnown RBP6.16□□□□□ -1.42
GYPB-204ENST00000504951 HS3ST2Q9Y278 367 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PAXBP1Q9Y5B6 917 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 PCDHGA3Q9Y5H0 932 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 SCN8AQ9UQD0 1980 aa6.16□□□□□ -1.42
GYPB-204ENST00000504951 FBN2P35556 2912 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 A0A1B0GVL5 298 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 PMS2P1A4D2B8 440 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 WIPF3A6NGB9 483 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 D6RAR5 112 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 TULP2O00295 520 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 PDXKO00764 312 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 NEBLO76041 1014 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 F13A1P00488 732 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 IGHA1P01876 353 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 SETSIPP0DME0 302 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 ZSCAN22P10073 491 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 CD58P19256 250 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 WT1P19544 449 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 GTF2H1P32780 548 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 CTSOP43234 321 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 ME1P48163 572 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 RPL34P49207 117 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 RAD23BP54727 409 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 POLE2P56282 527 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 TBX4P57082 545 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 RPS24P62847 133 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 RPS21P63220 83 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 DNM1Q05193 864 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 BST2Q10589 180 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 EIF2B5Q13144 721 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 PTK2BQ14289 1009 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 DCAF6Q58WW2 860 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 ESRP1Q6NXG1 681 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 OGFOD3Q6PK18 319 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 APCDD1Q8J025 514 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 FSTL5Q8N475 847 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 GALNT11Q8NCW6 608 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 SLC35F5Q8WV83 523 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 NDRG1Q92597 394 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 SEMA4DQ92854 862 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 EEF2KMTQ96G04 330 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 FCRL2Q96LA5 508 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 HSFY1Q96LI6 401 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 PRICKLE1Q96MT3 831 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 NOX5Q96PH1 765 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 GFM1Q96RP9 751 aaKnown RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 KLF6Q99612 283 aaPredicted RBP6.15□□□□□ -1.42
GYPB-204ENST00000504951 CMKLR1Q99788 373 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 CALN1Q9BXU9 219 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 MMRN2Q9H8L6 949 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 LRRC4Q9HBW1 653 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 TMPRSS4Q9NRS4 437 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 RCOR1Q9UKL0 485 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 MAPK8IP1Q9UQF2 711 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 NAALADL1Q9UQQ1 740 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 CA5BQ9Y2D0 317 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 OR51B4Q9Y5P0 310 aa6.15□□□□□ -1.42
GYPB-204ENST00000504951 RP1L1Q8IWN7 2480 aaPredicted RBP6.15□□□□□ -1.43
GYPB-204ENST00000504951 LRRK1Q38SD2 2015 aa6.15□□□□□ -1.43
GYPB-204ENST00000504951 TRPM6Q9BX84 2022 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms