RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PPHLN1Q8NEY8 458 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 ARRDC2Q8TBH0 407 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 TSSK1BQ9BXA7 367 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 KLF16Q9BXK1 252 aaPredicted RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PDFQ9HBH1 243 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 IARS2Q9NSE4 1012 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 ZFP37Q9Y6Q3 630 aaPredicted RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 GLRA3O75311 464 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 ACRP10323 421 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 CD86P42081 329 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 CHRNA4P43681 627 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 SCTRP47872 440 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 CDH4P55283 916 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 DSC2Q02487 901 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 TWF1Q12792 350 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 LBRQ14739 615 aaKnown RBP21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 VEPH1Q14D04 833 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 TAF12Q16514 161 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 GALNTL6Q49A17 601 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 FSTL4Q6MZW2 842 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 DNAJB7Q7Z6W7 309 aaPredicted RBP21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 GPR65Q8IYL9 337 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 C10orf82Q8WW14 230 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 PRICKLE1Q96MT3 831 aaPredicted RBP21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 ATXN3LQ9H3M9 355 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 GKN1Q9NS71 199 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 DCDC2Q9UHG0 476 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 EMCNQ9ULC0 261 aa21.64■■□□□ 1.05
UBE2D3-216ENST00000503742 C2orf78A6NCI8 922 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 BIRC5O15392 142 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 LILRB3O75022 631 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 BAIAP3O94812 1187 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 GSTA1P08263 222 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 RAG1P15918 1043 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ARCN1P48444 511 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 INSCQ1MX18 579 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TMCO4Q5TGY1 634 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TMEM150AQ86TG1 271 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 CNTN4Q8IWV2 1026 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TRIM42Q8IWZ5 723 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 MECRQ9BV79 373 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 MAGEH1Q9H213 219 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 RXFP1Q9HBX9 757 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 SNX15Q9NRS6 342 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TREX1Q9NSU2 369 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 NSMCE4AQ9NXX6 385 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 MAFFQ9ULX9 164 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 SLC12A4Q9UP95 1085 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 PRRG1O14668 218 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 GSRP00390 522 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 BPGMP07738 259 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ARNTP27540 789 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 HOXD9P28356 352 aaPredicted RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TYK2P29597 1187 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 CORO1AP31146 461 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 SERPINB8P50452 374 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ITKQ08881 620 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 MSLNQ13421 630 aaPredicted RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 PCSK7Q16549 785 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 RABGAP1LQ5R372 815 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ESRP1Q6NXG1 681 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 TMEM199Q8N511 208 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 FITM2Q8N6M3 262 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ZNF398Q8TD17 642 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 THOC1Q96FV9 657 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 ZNF599Q96NL3 588 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 MRPL17Q9NRX2 175 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 GGT7Q9UJ14 662 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 INSL5Q9Y5Q6 135 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 USH1CQ9Y6N9 552 aa21.63■■□□□ 1.05
UBE2D3-216ENST00000503742 A0A0D9SEW6 157 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 CCDC78A2IDD5 438 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 GOLGA8TH3BQL2 631 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 TIMM44O43615 452 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 F7P08709 466 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 ELF1P32519 619 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 PPM1AP35813 382 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 RPS24P62847 133 aaKnown RBP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 GNA12Q03113 381 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 CCDC15Q0P6D6 951 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 DBN1Q16643 649 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 PPM1JQ5JR12 505 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 KDELC2Q7Z4H8 507 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 GBP7Q8N8V2 638 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 OR52K2Q8NGK3 314 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 RAB3IL1Q8TBN0 382 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 ATP2A3Q93084 1043 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 RANBP9Q96S59 729 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 YME1L1Q96TA2 773 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 PLXNA4Q9HCM2 1894 aa21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 UXTQ9UBK9 157 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 MTO1Q9Y2Z2 717 aaKnown RBP21.62■■□□□ 1.05
UBE2D3-216ENST00000503742 TEX28O15482 410 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 SIN3BO75182 1162 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 UBOX5O94941 541 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 TGDSO95455 350 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 PRKCGP05129 697 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 NEFHP12036 1026 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 N4BP2L1Q5TBK1 243 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms