RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PAFAH1B1P43034 410 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 MTNR1AP48039 350 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CPA2P48052 419 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CYP2J2P51589 502 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CASP6P55212 293 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CDH15P55291 814 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 MPP1Q00013 466 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CFHR1Q03591 330 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CAMK1Q14012 370 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 MAPRE1Q15691 268 aaKnown RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 C5orf22Q49AR2 442 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC9C1Q4G0N8 1177 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 FBXO43Q4G163 708 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 KIAA1755Q5JYT7 1200 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 GFI1BQ5VTD9 330 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM171A1Q5VUB5 890 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 NAA35Q5VZE5 725 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 ACAD10Q6JQN1 1059 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 AADACL2Q6P093 401 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 GJB7Q6PEY0 223 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 LRIG3Q6UXM1 1119 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 KRBA2Q6ZNG9 492 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CYB5R4Q7L1T6 521 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 RSRC2Q7L4I2 434 aaKnown RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 PELI3Q8N2H9 469 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SCAIQ8N9R8 606 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 PCYOX1LQ8NBM8 494 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SETD9Q8NE22 299 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 PPHLN1Q8NEY8 458 aaKnown RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 RFWD2Q8NHY2 731 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 BCAS4Q8TDM0 211 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBC1D22AQ8WUA7 517 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CNOT9Q92600 299 aaKnown RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 ELP4Q96EB1 424 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 EYA3Q99504 573 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CLSTN3Q9BQT9 956 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 PIMREGQ9BSJ6 248 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 FUZQ9BT04 418 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 AGXT2Q9BYV1 514 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 INTS2Q9H0H0 1204 aaKnown RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 LMAN2LQ9H0V9 348 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM234AQ9H0X4 552 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 TTYH1Q9H313 450 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 UNC45AQ9H3U1 944 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZHX3Q9H4I2 956 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF304Q9HCX3 659 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SMC4Q9NTJ3 1288 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 IRAK4Q9NWZ3 460 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 UPB1Q9UBR1 384 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 UTS2RQ9UKP6 389 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 DHDHQ9UQ10 334 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SCINQ9Y6U3 715 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 TARSL2A2RTX5 802 aaKnown RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 OR6C68A6NDL8 312 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM247A6NEH6 219 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 B4E171 279 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TEX22C9J3V5 150 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 H3BNX3 289 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 RHODO00212 210 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TNPO2O14787 897 aaKnown RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TSPAN4O14817 238 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 PER2O15055 1255 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 NEURL1O76050 574 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 WNT1P04628 370 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 URODP06132 367 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 CHRM4P08173 479 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 KLRC2P26717 231 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 ABCD3P28288 659 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TSPAN7P41732 249 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 SKIV2L2P42285 1042 aaKnown RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 GPD2P43304 727 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 PTPN9P43378 593 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 RPS13P62277 151 aaKnown RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZXDBP98169 803 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF91Q05481 1191 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 PMPCAQ10713 525 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC18A3Q16572 532 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 PLK5Q496M5 336 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM69AQ5T7M9 428 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM268Q5VZI3 342 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAAH2Q6GMR7 532 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM57BQ71RH2 274 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 MON1AQ86VX9 555 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 CCDC25Q86WR0 208 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 GHDCQ8N2G8 530 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZCCHC10Q8TBK6 192 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM255BQ8WV15 326 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 RAB40AQ8WXH6 277 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 HSPH1Q92598 858 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 SKA1Q96BD8 255 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM204Q9BSN7 226 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 IFT27Q9BW83 186 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMX4Q9H1E5 349 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 HIPK3Q9H422 1215 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC32A1Q9H598 525 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 EPHX3Q9H6B9 360 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 AAMDCQ9H7C9 122 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM45AQ9NWC5 275 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms