RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SYT12Q8IV01 421 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 TP53INP2Q8IXH6 220 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 RHOT1Q8IXI2 618 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 NETO2Q8NC67 525 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 DNASE2BQ8WZ79 361 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 PIGKQ92643 395 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 LACRTQ9GZZ8 138 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 GRPEL1Q9HAV7 217 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 HECAQ9UBI9 543 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 IPO11Q9UI26 975 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 PILRBQ9UKJ0 227 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 WASF2Q9Y6W5 498 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 ABCA7Q8IZY2 2146 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 EP300Q09472 2414 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 C10orf142B7Z368 130 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 SPOPO43791 374 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 LEFTY1O75610 366 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 ADPRHP54922 357 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 RFTN1Q14699 578 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 PAFAH1B3Q15102 231 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 CCDC6Q16204 474 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 ARSIQ5FYB1 569 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 WDR45BQ5MNZ6 344 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 SYCP2LQ5T4T6 812 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 NCBP2-AS2Q69YL0 99 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 ARHGAP36Q6ZRI8 547 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 TPCN2Q8NHX9 752 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 GRIN3AQ8TCU5 1115 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 VOPP1Q96AW1 172 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 LRIG1Q96JA1 1093 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 GDAP1L1Q96MZ0 367 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 C6orf106Q9H6K1 298 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 SP110Q9HB58 689 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 TMEM74BQ9NUR3 256 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 DDX56Q9NY93 547 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 LHX3Q9UBR4 397 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 HYOU1Q9Y4L1 999 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 FAM186AA6NE01 2351 aa18.53■□□□□ 0.56
PDLIM7-209ENST00000503346 LRRD1A4D1F6 860 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 GOLGA6L3A6NEY3 463 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 C3orf70A6NLC5 250 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 RNF103O00237 685 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 KPNA3O00505 521 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 PSTPIP1O43586 416 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 POP4O95707 220 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 IGSF6O95976 241 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 RHOAP61586 193 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 CNTN1Q12860 1018 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 MYLK3Q32MK0 819 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 POM121L1PQ3SYA9 428 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 AGBL4Q5VU57 503 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 DCAF12L1Q5VU92 463 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 PRR23CQ6ZRP0 262 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 LRRC49Q8IUZ0 686 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 KIAA2013Q8IYS2 634 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 TXLNBQ8N3L3 684 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 PQLC3Q8N755 202 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 OR2T34Q8NGX1 318 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 ARRDC3Q96B67 414 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 PPP1R16AQ96I34 528 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF599Q96NL3 588 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 KDM4CQ9H3R0 1056 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 GOLPH3Q9H4A6 298 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
PDLIM7-209ENST00000503346 GVINP1Q7Z2Y8 2422 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 LRRC72A6NJI9 287 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 MEI4A8MW99 385 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 PLK4O00444 970 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 MFSD11O43934 449 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 MAFKO60675 156 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 CCDC15Q0P6D6 951 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 ATXN7L2Q5T6C5 722 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 PIP5KL1Q5T9C9 394 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 KIAA0895LQ68EN5 471 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 NCEH1Q6PIU2 408 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 KIAA1328Q86T90 577 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 RYBPQ8N488 228 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 CCDC112Q8NEF3 446 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 OR6K2Q8NGY2 324 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 OR14C36Q8NHC7 312 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 RNF157Q96PX1 679 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 DESI2Q9BSY9 194 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 HDAC8Q9BY41 377 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 SMOC1Q9H4F8 434 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 ZDHHC6Q9H6R6 413 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 DYRK4Q9NR20 520 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 EVLQ9UI08 416 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 SPAG17Q6Q759 2223 aa18.51■□□□□ 0.55
PDLIM7-209ENST00000503346 ATXN2Q99700 1313 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 PLRG1O43660 514 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 PALMO75781 387 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 PEX11BO96011 259 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 KRT1P04264 644 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 ITGB7P26010 798 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 GKP32189 559 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 LMNB2Q03252 620 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 RAD51Q06609 339 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms