RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 BICD1Q96G01 975 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 DHTKD1Q96HY7 919 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 NSUN5Q96P11 429 aaKnown RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 ALPK1Q96QP1 1244 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 FAM129BQ96TA1 746 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 TSG101Q99816 390 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 KIFC3Q9BVG8 833 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 STRA6Q9BX79 667 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NFKBIZQ9BYH8 718 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 FGFBP2Q9BYJ0 223 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 B3GNT4Q9C0J1 378 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 STRADBQ9C0K7 418 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NAT10Q9H0A0 1025 aaKnown RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 SYNDIG1Q9H7V2 258 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 TMLHEQ9NVH6 421 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 PRMT7Q9NVM4 692 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 FRRS1LQ9P0K9 344 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ARMCX1Q9P291 453 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 MKL2Q9ULH7 1088 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CTNND2Q9UQB3 1225 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 MAPK8IP1Q9UQF2 711 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CNTRLQ7Z7A1 2325 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 LRP4O75096 1905 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 A6NHS1 94 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 SMTNL1A8MU46 457 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 SHISA8B8ZZ34 492 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 M0QZQ0 153 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 ACKR2O00590 384 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PDXKO00764 312 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 SLC9A3R1O14745 358 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 RGS9O75916 674 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 PIGRP01833 764 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 STSP08842 583 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 ALPPL2P10696 532 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 HAPLN1P10915 354 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 EDN3P14138 238 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 MATR3P43243 847 aaKnown RBP eCLIP5.37□□□□□ -1.55
FXN-205ENST00000498653 TUFMP49411 452 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 LIG4P49917 911 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PGDP52209 483 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 COPB1P53618 953 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 STX17P56962 302 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 SNRPFP62306 86 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 DEFA6Q01524 100 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 FOLH1Q04609 750 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 FOXM1Q08050 763 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PRPF4BQ13523 1007 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 TAF12Q16514 161 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 TPD52L1Q16890 204 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 FAM187BQ17R55 369 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PAPD7Q5XG87 772 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 ZCCHC8Q6NZY4 707 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 PODNL1Q6PEZ8 512 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 ZPBP2Q6X784 338 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 C1orf229Q6ZS94 237 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 C11orf57Q6ZUT1 292 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 HS2ST1Q7LGA3 356 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 BEND7Q8N7W2 519 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 MFSD2AQ8NA29 543 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 MCUQ8NE86 351 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 OR10T2Q8NGX3 314 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 GOLGA5Q8TBA6 731 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 KCNN1Q92952 543 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PNPLA2Q96AD5 504 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 LCORQ96JN0 433 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 SERAC1Q96JX3 654 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 COX4I2Q96KJ9 171 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 TREX2Q9BQ50 279 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 CCDC3Q9BQI4 270 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 TARS2Q9BW92 718 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 MRPL4Q9BYD3 311 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 CCDC113Q9H0I3 377 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 PDZD7Q9H5P4 517 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 GPN2Q9H9Y4 310 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 SGK2Q9HBY8 427 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 DNAJC17Q9NVM6 304 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 RCOR3Q9P2K3 495 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 CGNQ9P2M7 1197 aaKnown RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 THAP10Q9P2Z0 257 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 RWDD2AQ9UIY3 292 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 MAGED2Q9UNF1 606 aaPredicted RBP5.37□□□□□ -1.55
FXN-205ENST00000498653 NTNG1Q9Y2I2 539 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 NUB1Q9Y5A7 615 aa5.37□□□□□ -1.55
FXN-205ENST00000498653 DYSFO75923 2080 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 LOC101059948A0A1B0GTJ6 334 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SMIM28A0A1B0GU29 152 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 BECN2A8MW95 431 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ANKRD63C9JTQ0 380 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 M0R082 166 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 HNRNPDLO14979 420 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 KIAA0391O15091 583 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 SCAMP1O15126 338 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 CETN3O15182 167 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 CLIC2O15247 247 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TGFB1I1O43294 461 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 CACNG3O60359 315 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 RAD1O60671 282 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms