RNA–Protein interactions for RNA: ENST00000497870.1

PLS3-208, Transcript of plastin 3, human

TSL 4

Gene PLS3, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLS3-208	ENST00000497870	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ARHGAP10	A1A4S6	786 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	WDR91	A4D1P6	747 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	LIPT2	A6NK58	231 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	TP73	O15350	636 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CEP104	O60308	925 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	SERPINC1	P01008	464 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	TUBB4A	P04350	444 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CD63	P08962	238 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	PRR35	P0CG20	571 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	NFKBIA	P25963	317 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CERS1	P27544	350 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	POU1F1	P28069	291 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	EPHB2	P29323	1055 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	TYK2	P29597	1187 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CHRNA5	P30532	468 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CPA2	P48052	419 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	SLC12A2	P55011	1212 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CHAF1B	Q13112	559 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	AIMP2	Q13155	320 aa	Known RBP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	SLC14A1	Q13336	389 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	SEMA3A	Q14563	771 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	EZH2	Q15910	746 aa	Known RBP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	PLK5	Q496M5	336 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	CEP78	Q5JTW2	689 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	MFSD4B	Q5TF39	518 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ATG9B	Q674R7	924 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ZNF626	Q68DY1	528 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	C11orf87	Q6NUJ2	197 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	C16orf54	Q6UWD8	224 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	C17orf99	Q6UX52	265 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	IL20RB	Q6UXL0	311 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	RTL10	Q7L3V2	364 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	KRT74	Q7RTS7	529 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	TADA2B	Q86TJ2	420 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	IGFN1	Q86VF2	1251 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	GLCCI1	Q86VQ1	547 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	OR8H2	Q8N162	312 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	DNAAF1	Q8NEP3	725 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	BCAS4	Q8TDM0	211 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	SCARB1	Q8WTV0	552 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	PIGK	Q92643	395 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ADAD1	Q96M93	576 aa	Known RBP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	MAP7D2	Q96T17	732 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	MPHOSPH8	Q99549	860 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ZDHHC7	Q9NXF8	308 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	RNF7	Q9UBF6	113 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	UPB1	Q9UBR1	384 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	KCNE2	Q9Y6J6	123 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	PIAS3	Q9Y6X2	628 aa		4.22	□□□□□ -1.73
PLS3-208	ENST00000497870	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.21	□□□□□ -1.73
PLS3-208	ENST00000497870		A0A1W2PQM1	296 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	LRRC53	A6NM62	1247 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	EIF3CL	B5ME19	914 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	SMIM22	K7EJ46	135 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	PPP6C	O00743	305 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	BCAT2	O15382	392 aa	Predicted RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	MSI1	O43347	362 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	PLOD3	O60568	738 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	TFEB	P19484	476 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	PPARG	P37231	505 aa	Predicted RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ZNF81	P51508	661 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	CYP2J2	P51589	502 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	OLR1	P78380	273 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	HSF1	Q00613	529 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	RHAG	Q02094	409 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	EPS8	Q12929	822 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	GALNT3	Q14435	633 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	EDRF1	Q3B7T1	1238 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	DPCR1	Q3MIW9	517 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	SUPT20HL1	Q3ZLR7	823 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	PLEKHS1	Q5SXH7	462 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	FAM171A1	Q5VUB5	890 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	NCAPH2	Q6IBW4	605 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	CDC73	Q6P1J9	531 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	NCEH1	Q6PIU2	408 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	LRIG3	Q6UXM1	1119 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	RBM44	Q6ZP01	1051 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	IKBIP	Q70UQ0	350 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	PRSS45	Q7RTY3	260 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	RHPN2	Q8IUC4	686 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	GALNT16	Q8N428	558 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	EXD3	Q8N9H8	876 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	C1orf131	Q8NDD1	294 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	SETD9	Q8NE22	299 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ZNF398	Q8TD17	642 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ARHGEF2	Q92974	986 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	FAM120B	Q96EK7	910 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	CLMN	Q96JQ2	1002 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ASB2	Q96Q27	587 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ZNF347	Q96SE7	839 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	H2AFJ	Q9BTM1	129 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	QTRT1	Q9BXR0	403 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	MAK16	Q9BXY0	300 aa	Known RBP	4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	ITPA	Q9BY32	194 aa		4.21	□□□□□ -1.74
PLS3-208	ENST00000497870	SH2D4A	Q9H788	454 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms