RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SYN3O14994 580 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 LYL1P12980 280 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 SKIV2L2P42285 1042 aaKnown RBP4.5□□□□□ -1.69
TRIM4-205ENST00000496896 PPP3CCP48454 512 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 PCYT1AP49585 367 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 DSCR9P59020 149 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 PDCLQ13371 301 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 TDRD12Q587J7 1177 aaKnown RBP4.5□□□□□ -1.69
TRIM4-205ENST00000496896 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 NADSYN1Q6IA69 706 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 SYT13Q7L8C5 426 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 GALNT15Q8N3T1 639 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 CEP76Q8TAP6 659 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 ICKQ9UPZ9 632 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 SRPRBQ9Y5M8 271 aaKnown RBP4.5□□□□□ -1.69
TRIM4-205ENST00000496896 TRIP12Q14669 1992 aaPredicted RBP4.5□□□□□ -1.69
TRIM4-205ENST00000496896 KIF21AQ7Z4S6 1674 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 CCER2I3L3R5 266 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 ASAP2O43150 1006 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 LDB2O43679 373 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 LIASO43766 372 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 YWHAQP27348 245 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 RBM5P52756 815 aaKnown RBP eCLIP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 PRKAA2P54646 552 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 CDH12P55289 794 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 PDCD2Q16342 344 aaPredicted RBP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 LRRC24Q50LG9 513 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 JMJD6Q6NYC1 403 aaPredicted RBP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 PATL1Q86TB9 770 aaKnown RBP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 TRIM74Q86UV6 250 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 TRIM73Q86UV7 250 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 DCP1BQ8IZD4 617 aaKnown RBP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 FAM216AQ8WUB2 273 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 NCSTNQ92542 709 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 APOLD1Q96LR9 279 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 MPHOSPH6Q99547 160 aaKnown RBP4.49□□□□□ -1.69
TRIM4-205ENST00000496896 TM6SF1Q9BZW5 370 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 RASSF1Q9NS23 344 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 DHDHQ9UQ10 334 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 CLDN16Q9Y5I7 305 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 MAPKBP1O60336 1514 aa4.49□□□□□ -1.69
TRIM4-205ENST00000496896 CASKIN1Q8WXD9 1431 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 hCG_1642624A0A1W2PR95 340 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 EYA2O00167 538 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 STRNO43815 780 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 TK1P04183 234 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 PRSS2P07478 247 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 CSF1P09603 554 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 ADD2P35612 726 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 GPR12P47775 334 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 MTNR1AP48039 350 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 SEC61A1P61619 476 aaKnown RBP4.48□□□□□ -1.69
TRIM4-205ENST00000496896 ZNF284Q2VY69 593 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 RBFAQ8N0V3 343 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 ADAMTS14Q8WXS8 1223 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 GOLGA1Q92805 767 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 PPP1R10Q96QC0 940 aaKnown RBP4.48□□□□□ -1.69
TRIM4-205ENST00000496896 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
TRIM4-205ENST00000496896 PAGR1Q9BTK6 254 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 HERC2P3Q9BVR0 1158 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 PLEKHB1Q9UF11 243 aaPredicted RBP4.48□□□□□ -1.69
TRIM4-205ENST00000496896 CD207Q9UJ71 328 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 CDH22Q9UJ99 828 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 PROCRQ9UNN8 238 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 RAB3GAP2Q9H2M9 1393 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 FGD5Q6ZNL6 1462 aa4.48□□□□□ -1.69
TRIM4-205ENST00000496896 FMN1Q68DA7 1419 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 OR6C68A6NDL8 312 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 CLDN7O95471 211 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 NAGAP17050 411 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
TRIM4-205ENST00000496896 DPP6P42658 865 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 AMTP48728 403 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 AARSP49588 968 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ART1P52961 327 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 NUDT6P53370 316 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 PMS2P54278 862 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ARHGAP8P85298 464 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 BYSLQ13895 437 aaKnown RBP4.47□□□□□ -1.69
TRIM4-205ENST00000496896 TRIM14Q14142 442 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 HNF4GQ14541 408 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 RPE65Q16518 533 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 TUBB8Q3ZCM7 444 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ZNF484Q5JVG2 852 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 DLK2Q6UY11 383 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 SYNE3Q6ZMZ3 975 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 VPS37AQ8NEZ2 397 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ZMIZ2Q8NF64 920 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 SPPL3Q8TCT6 385 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 CDT1Q9H211 546 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 C6orf106Q9H6K1 298 aaPredicted RBP4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ACAD9Q9H845 621 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 KIF17Q9P2E2 1029 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 ZNF112Q9UJU3 913 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 SLC45A1Q9Y2W3 748 aa4.47□□□□□ -1.69
TRIM4-205ENST00000496896 MORC2Q9Y6X9 1032 aaPredicted RBP4.47□□□□□ -1.69
TRIM4-205ENST00000496896 CARMIL1Q5VZK9 1371 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms