RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 KBTBD8Q8NFY9 601 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 LPGAT1Q92604 370 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 TOP1MTQ969P6 601 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 FRMD8P1Q9BZ68 369 aaPredicted RBP8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 PPA2Q9H2U2 334 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 TMEM245Q9H330 911 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 OLAHQ9NV23 265 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM8A1Q9UBU6 413 aa8.29□□□□□ -1.08
CRNKL1-205ENST00000496549 BCL9LQ86UU0 1499 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 XRN1Q8IZH2 1706 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 LOC110117498-PIK3R3F6TDL0 507 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 EML1O00423 815 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 DNAJB5O75953 348 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RSL1D1O76021 490 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PROSCO94903 275 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PDE8BO95263 885 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 HSMCR30P0CW71 290 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 MBL2P11226 248 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 MMP8P22894 467 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 MYF6P23409 242 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CPOXP36551 454 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RPS9P46781 194 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 GABRB2P47870 512 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 LEPRP48357 1165 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 GPX6P59796 221 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RHDQ02161 417 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 TAP1Q03518 808 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 C19orf57Q0VDD7 668 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 GALNT3Q14435 633 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 COLEC12Q5KU26 742 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ADAMTSL2Q86TH1 951 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 LINC00523Q86TU6 105 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 TBC1D21Q8IYX1 336 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CCNYL1Q8N7R7 359 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 BCL7CQ8WUZ0 217 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 SERAC1Q96JX3 654 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 TARS2Q9BW92 718 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 TMEM168Q9H0V1 697 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ADAMTS10Q9H324 1103 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PNPOQ9NVS9 261 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NSMCE4AQ9NXX6 385 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CACNA2D2Q9NY47 1150 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 DRG1Q9Y295 367 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RNF11Q9Y3C5 154 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 HCN4Q9Y3Q4 1203 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 A8MV72 311 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 LIASO43766 372 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 BANF1O75531 89 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 TOP3BO95985 862 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 EVI2BP34910 448 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 YAP1P46937 504 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CASP4P49662 377 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 KPNA2P52292 529 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ARHGDIAP52565 204 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ROR1Q01973 937 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 GALEQ14376 348 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 SEMA3AQ14563 771 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 MTERF2Q49AM1 385 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NOXA1Q86UR1 476 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 OR2T34Q8NGX1 318 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 OR2T3Q8NH03 318 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CENPNQ96H22 339 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 KIF17Q9P2E2 1029 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RGS17Q9UGC6 210 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ING4Q9UNL4 249 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 C1orf167Q5SNV9 1468 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ROBO1Q9Y6N7 1651 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CYB561D2O14569 222 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NKRFO15226 690 aaKnown RBP eCLIP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 HDAC3O15379 428 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CRCPO75575 148 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 UPK1BO75841 260 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PGK2P07205 417 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 IDUAP35475 653 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ABATP80404 500 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CYP51A1Q16850 503 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RBM48Q5RL73 367 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ATAD3CQ5T2N8 411 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 CNTD1Q8N815 330 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 KCTD6Q8NC69 237 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 GTF2H4Q92759 462 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NODALQ96S42 347 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 NAA50Q9GZZ1 169 aaKnown RBP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 DNAJC11Q9NVH1 559 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 KLQ9UEF7 1012 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PLCL2Q9UPR0 1127 aa8.28□□□□□ -1.08
CRNKL1-205ENST00000496549 PPLO60437 1756 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms