RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SH2D3CQ8N5H7 860 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 LZTR1Q8N653 840 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 PLD5Q8N7P1 536 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 VOPP1Q96AW1 172 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 PDFQ9HBH1 243 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 PRSS16Q9NQE7 514 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 AMFRQ9UKV5 643 aa12.14□□□□□ -0.47
APTX-233ENST00000496030 PACSIN2Q9UNF0 486 aaPredicted RBP12.14□□□□□ -0.47
APTX-233ENST00000496030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
APTX-233ENST00000496030 BPTFQ12830 3046 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 hCG_1818297A0A087WSY0 165 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 TMEM8BA6NDV4 472 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 TAF4O00268 1085 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 PRAMEF11O60813 436 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 PEX11BO96011 259 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 EPHX1P07099 455 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 PYGMP11217 842 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 KRT10P13645 584 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 PXNP49023 591 aaPredicted RBP12.13□□□□□ -0.47
APTX-233ENST00000496030 DGKEP52429 567 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 COPAP53621 1224 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 GBE1Q04446 702 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 E2F5Q15329 346 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 LLGL1Q15334 1064 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 DLG2Q15700 870 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 DCAF12L1Q5VU92 463 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 SDE2Q6IQ49 451 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 RETSATQ6NUM9 610 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 AADACL2Q6P093 401 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 LEKR1Q6ZMV7 388 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 CAMKK1Q8N5S9 505 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
APTX-233ENST00000496030 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 FAM129BQ96TA1 746 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
APTX-233ENST00000496030 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
APTX-233ENST00000496030 ARHGAP42A6NI28 874 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 MIF4GDA9UHW6 222 aaKnown RBP12.12□□□□□ -0.47
APTX-233ENST00000496030 MFSD11O43934 449 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 MAFKO60675 156 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 SIN3BO75182 1162 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 GABRG2P18507 467 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 PTPN7P35236 360 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
APTX-233ENST00000496030 RWDD2BP57060 319 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 GALNT2Q10471 571 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 CYTH1Q15438 398 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 TFDP3Q5H9I0 405 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 SCNM1Q9BWG6 230 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 MKRN2Q9H000 416 aaKnown RBP12.12□□□□□ -0.47
APTX-233ENST00000496030 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 PRDM16Q9HAZ2 1276 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 DTLQ9NZJ0 730 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 EBF1Q9UH73 591 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 IPO11Q9UI26 975 aaKnown RBP12.12□□□□□ -0.47
APTX-233ENST00000496030 SLC25A13Q9UJS0 675 aa12.12□□□□□ -0.47
APTX-233ENST00000496030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-233ENST00000496030 MAST4O15021 2626 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 EDDM13A0A1B0GTR0 161 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 TCRBV21S2A2A0A5A6 115 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 RNF103O00237 685 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 DFFAO00273 331 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 MAP3K6O95382 1288 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 APBB3O95704 486 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 MPLP40238 635 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 CLCN6P51797 869 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 COPS2P61201 443 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 IL10RBQ08334 325 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 PPP2R5EQ16537 467 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 INO80DQ53TQ3 878 aaPredicted RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 NPNTQ6UXI9 565 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 Q6ZVU0 165 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 ATP11CQ8NB49 1132 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 TSTD1Q8NFU3 115 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 GAB3Q8WWW8 586 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 ISG20Q96AZ6 181 aaKnown RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 ZNF419Q96HQ0 510 aaPredicted RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 RBM41Q96IZ5 413 aaKnown RBP12.11□□□□□ -0.47
APTX-233ENST00000496030 LOXL4Q96JB6 756 aa12.11□□□□□ -0.47
APTX-233ENST00000496030 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms