RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 TPCN2Q8NHX9 752 aa10□□□□□ -0.81
CALD1-223ENST00000496024 PCDH19Q8TAB3 1148 aa10□□□□□ -0.81
CALD1-223ENST00000496024 SNX19Q92543 992 aa10□□□□□ -0.81
CALD1-223ENST00000496024 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
CALD1-223ENST00000496024 LOXL4Q96JB6 756 aa10□□□□□ -0.81
CALD1-223ENST00000496024 EXOC2Q96KP1 924 aa10□□□□□ -0.81
CALD1-223ENST00000496024 HEPHQ9BQS7 1158 aa10□□□□□ -0.81
CALD1-223ENST00000496024 CEP44Q9C0F1 390 aa10□□□□□ -0.81
CALD1-223ENST00000496024 BTBD1Q9H0C5 482 aa10□□□□□ -0.81
CALD1-223ENST00000496024 C6orf106Q9H6K1 298 aaPredicted RBP10□□□□□ -0.81
CALD1-223ENST00000496024 HECAQ9UBI9 543 aaPredicted RBP10□□□□□ -0.81
CALD1-223ENST00000496024 TRIM10Q9UDY6 481 aa10□□□□□ -0.81
CALD1-223ENST00000496024 IL36AQ9UHA7 158 aa10□□□□□ -0.81
CALD1-223ENST00000496024 IPO11Q9UI26 975 aaKnown RBP10□□□□□ -0.81
CALD1-223ENST00000496024 PPM1HQ9ULR3 514 aa10□□□□□ -0.81
CALD1-223ENST00000496024 SCML1Q9UN30 329 aa10□□□□□ -0.81
CALD1-223ENST00000496024 DOCK9Q9BZ29 2069 aa10□□□□□ -0.81
CALD1-223ENST00000496024 CEP250Q9BV73 2442 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 SPTBN4Q9H254 2564 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 TNRC6BQ9UPQ9 1833 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 MACROD2A1Z1Q3 448 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 BCLAF3A2AJT9 711 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 RNF103O00237 685 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 KRIT1O00522 736 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 ALOX15BO15296 676 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 MFSD11O43934 449 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 LEFTY1O75610 366 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 FSBPO95073 299 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 IGSF6O95976 241 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 PRNPP04156 253 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 SERPINB6P35237 376 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 DRD3P35462 400 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 MPLP40238 635 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 HADHBP55084 474 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 SNRPD1P62314 119 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 DYNLT1P63172 113 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 CNTN1Q12860 1018 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 SFSWAPQ12872 951 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 CYTH1Q15438 398 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 DCAF12L1Q5VU92 463 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 AFMIDQ63HM1 303 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 TCEAL6Q6IPX3 200 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 NCEH1Q6PIU2 408 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 USP30Q70CQ3 517 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 RFX6Q8HWS3 928 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 RHOT1Q8IXI2 618 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 ATPAF2Q8N5M1 289 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 OR2AP1Q8NGE2 309 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 OR14C36Q8NHC7 312 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 FAM71BQ8TC56 605 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 LRRN4Q8WUT4 740 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 TCEAL3Q969E4 200 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 ISG20Q96AZ6 181 aaKnown RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 ARRDC3Q96B67 414 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 ZNF670Q9BS34 389 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 MIR1-1HGQ9H1L0 117 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 PDFQ9HBH1 243 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 SGK2Q9HBY8 427 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 DYRK4Q9NR20 520 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 SEMA4GQ9NTN9 838 aa9.99□□□□□ -0.81
CALD1-223ENST00000496024 RCOR3Q9P2K3 495 aaPredicted RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 EVLQ9UI08 416 aaPredicted RBP9.99□□□□□ -0.81
CALD1-223ENST00000496024 CFAP54Q96N23 3096 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 ADAMTS9Q9P2N4 1935 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3DA0A087WVF3 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3IA0A087WXS9 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3EA0A087X179 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3KA0A087X1G2 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3FA6NER0 549 aaPredicted RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 LRRC72A6NJI9 287 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 PATE3B3GLJ2 98 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3LB9A6J9 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 INSIG1O15503 277 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 PJA2O43164 708 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 PALMO75781 387 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 POP4O95707 220 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 IGLV3-19P01714 112 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 CFIP05156 583 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 UGT2B4P06133 528 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3HP0C7X1 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 MARCKSL1P49006 195 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 GBE1Q04446 702 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 IL10RBQ08334 325 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 KIF5AQ12840 1032 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 MYLK3Q32MK0 819 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 INO80DQ53TQ3 878 aaPredicted RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 SPDYCQ5MJ68 293 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 SYCP2LQ5T4T6 812 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 LRRC38Q5VT99 294 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 KAZNQ674X7 775 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 NCBP2-AS2Q69YL0 99 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3GQ6DHY5 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3CQ6IPX1 549 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 MFSD7Q6UXD7 560 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TBC1D3Q8IZP1 549 aaPredicted RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 PQLC3Q8N755 202 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TSEN2Q8NCE0 465 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 TMIEQ8NEW7 156 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms