RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZFP69BQ9UJL9 534 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 SLC39A10Q9ULF5 831 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CTNND2Q9UQB3 1225 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 CRYL1Q9Y2S2 319 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MED16Q9Y2X0 877 aa4.59□□□□□ -1.67
VPS52-222ENST00000495981 MYO16Q9Y6X6 1858 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 LNP1A1A4G5 178 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CASTOR2A6NHX0 329 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 EIF4E1BA6NMX2 242 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 PATE3B3GLJ2 98 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TMEM189-UBE2V1I3L0A0 370 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TRIM38O00635 465 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 DYRK3O43781 588 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SNX2O60749 519 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 PHF2O75151 1096 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 RECQL4O94761 1208 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 MT-ND5P03915 603 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 C8AP07357 584 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 FTH1P19P0C7X4 201 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CHRNB1P11230 501 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 FDPSP14324 419 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 DDCP20711 480 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 AXLP30530 894 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 ADCY8P40145 1251 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 MAGEA9P43362 315 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 OR1G1P47890 313 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SOX8P57073 446 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 YBX1P67809 324 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 AKAP17AQ02040 695 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 CREMQ03060 361 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CTTNQ14247 550 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 SPARCL1Q14515 664 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SLC5A9Q2M3M2 681 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 NCAPH2Q6IBW4 605 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SLC27A1Q6PCB7 646 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CD300LGQ6UXG3 332 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 PIK3AP1Q6ZUJ8 805 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 RFX8Q6ZV50 586 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 ZNF605Q86T29 641 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TMTC1Q8IUR5 882 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TXLNBQ8N3L3 684 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SIMC1Q8NDZ2 872 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CNNM3Q8NE01 707 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 FBXO18Q8NFZ0 1043 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 BRIX1Q8TDN6 353 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 HDAC7Q8WUI4 952 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 ZNF480Q8WV37 535 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TCP11Q8WWU5 503 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CPA5Q8WXQ8 436 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 ALG3Q92685 438 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 STAMQ92783 540 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 FGF13Q92913 245 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CYFIP2Q96F07 1278 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 ZNF274Q96GC6 653 aaPredicted RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 CCDC120Q96HB5 630 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SNX22Q96L94 193 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 WDR92Q96MX6 357 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 MTMR9Q96QG7 549 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 HSD17B14Q9BPX1 270 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CLSTN3Q9BQT9 956 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 EDEM2Q9BV94 578 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 APOL6Q9BWW8 343 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 TM6SF1Q9BZW5 370 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 POLR3FQ9H1D9 316 aaPredicted RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 FZD8Q9H461 694 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 PLEKHA4Q9H4M7 779 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 SARS2Q9NP81 518 aaKnown RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS52-222ENST00000495981 SACM1LQ9NTJ5 587 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CCDC39Q9UFE4 941 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 AJAP1Q9UKB5 411 aaPredicted RBP4.58□□□□□ -1.68
VPS52-222ENST00000495981 ADAM28Q9UKQ2 775 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 CDH7Q9ULB5 785 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 MAN2B2Q9Y2E5 1009 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 PCNX2A6NKB5 2137 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 EML5Q05BV3 1969 aa4.58□□□□□ -1.68
VPS52-222ENST00000495981 LRRK2Q5S007 2527 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 GON4LQ3T8J9 2241 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ASCC3Q8N3C0 2202 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 FBN2P35556 2912 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 HELZP42694 1942 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 GREB1Q4ZG55 1949 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 A0A1B0GUA9 196 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CLCA1A8K7I4 914 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 INO80B-WBP1J3KQ70 363 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 J3QKU1 62 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ABLIM1O14639 778 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 DCLK1O15075 740 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 EXTL3O43909 919 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 NEMFO60524 1076 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CCNT1O60563 726 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 USO1O60763 962 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 PFKFB2O60825 505 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 DKC1O60832 514 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS52-222ENST00000495981 SLITRK3O94933 977 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 REC8O95072 547 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ABHD16AO95870 558 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 MPOP05164 745 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ANXA2P07355 339 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 HNRNPA1P09651 372 aaKnown RBP eCLIP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms