RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SETD3Q86TU7 594 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 GLOD4Q9HC38 313 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ZNF334Q9HCZ1 680 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 GDE1Q9NZC3 331 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 DOCK3Q8IZD9 2030 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 POP4O95707 220 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 GPR1P46091 355 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 DGKEP52429 567 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 HADHBP55084 474 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TXNRD3NBQ6F5E7 133 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 CCNYL1Q8N7R7 359 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ULK4Q96C45 1275 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 MED4Q9NPJ6 270 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.59□□□□□ -0.876e-10■■■□□ 18.6
GAPVD1-219ENST00000495955 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ILVBLA1L0T0 632 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ERI2A8K979 691 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TIMM44O43615 452 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 SMIM24O75264 130 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 RPL21P46778 160 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 SERPINB9P50453 376 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 CLCN4P51793 760 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 DSC2Q02487 901 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TTLL9Q3SXZ7 439 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 UGT3A1Q6NUS8 523 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 FBXO38Q6PIJ6 1188 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 MARK2Q7KZI7 788 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 PRELID2Q8N945 189 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ITFG1Q8TB96 612 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 FBXO25Q8TCJ0 367 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 HDAC7Q8WUI4 952 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 FAM129AQ9BZQ8 928 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 MATN3O15232 486 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 CNTN5O94779 1100 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 VAPBO95292 243 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 GFAPP14136 432 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ITGB6P18564 788 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 AARSP49588 968 aaKnown RBP eCLIP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 WNT3AP56704 352 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 MROH9Q5TGP6 573 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ADCK2Q7Z695 626 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ZNF513Q8N8E2 541 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 PRCCQ92733 491 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ACDQ96AP0 544 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 HSFX1Q9UBD0 423 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 TMEM59LQ9UK28 342 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
GAPVD1-219ENST00000495955 ZNFX1Q9P2E3 1918 aaKnown RBP9.59□□□□□ -0.88
GAPVD1-219ENST00000495955 SNAP91O60641 907 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ACVRL1P37023 503 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 HADHAP40939 763 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PTP4A2Q12974 167 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC12A1Q13621 1099 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 RUNX3Q13761 415 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 FBF1Q8TES7 1133 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CPSF2Q9P2I0 782 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 R3HDM2Q9Y2K5 976 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 GOLGA8TH3BQL2 631 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CTIFO43310 598 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 VPS26AO75436 327 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CTSEP14091 401 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ELK3P41970 407 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CRADDP78560 199 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 RING1Q06587 406 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 DHCR24Q15392 516 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 DUSP6Q16828 381 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 C14orf80Q86SX3 495 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 LRRC19Q9H756 370 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PSMC3IPQ9P2W1 217 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PCDHGC4Q9Y5F7 938 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ATG13O75143 517 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 SPAG7O75391 227 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 TMCC1O94876 653 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PGAM1P18669 254 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 GTF2F1P35269 517 aaKnown RBP eCLIP9.58□□□□□ -0.885e-6■■■■□ 24.4
GAPVD1-219ENST00000495955 C21orf59P57076 290 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 RBBP7Q16576 425 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 KCTD19Q17RG1 926 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 VITQ6UXI7 678 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 TPRG1Q6ZUI0 275 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 SCD5Q86SK9 330 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PHACTR4Q8IZ21 702 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ZMIZ2Q8NF64 920 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 KCNN1Q92952 543 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 QKIQ96PU8 341 aaKnown RBP eCLIP9.58□□□□□ -0.882e-6■■■□□ 14.9
GAPVD1-219ENST00000495955 RAD18Q9NS91 495 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PIAS3Q9Y6X2 628 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PDZK1P1A8MUH7 402 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 KDM1AO60341 852 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 RNF40O75150 1001 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CHEK2O96017 543 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 EOGTQ5NDL2 527 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ADGRD2Q7Z7M1 963 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms