RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 IL36AQ9UHA7 158 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
COL1A1-209ENST00000495677 FADS3Q9Y5Q0 445 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 TOR1BO14657 336 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 FPGTO14772 594 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 MUSKO15146 869 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 RAD51BO15315 384 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 P4HA2O15460 535 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SMAD6O43541 496 aaKnown RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 GCATO75600 419 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 LEFTY1O75610 366 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 ADRB3P13945 408 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 L1CAMP32004 1257 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 UGT1A5P35504 534 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 CDK17Q00537 523 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 GCNT1Q02742 428 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 PDE1CQ14123 709 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 PTK2BQ14289 1009 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 FOXD4L6Q3SYB3 417 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 FOXD4L3Q6VB84 417 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SDR16C5Q8N3Y7 309 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 CHST14Q8NCH0 376 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SLC2A13Q96QE2 648 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-209ENST00000495677 VANGL2Q9ULK5 521 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 PADI4Q9UM07 663 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 HS3ST4Q9Y661 456 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 WASF2Q9Y6W5 498 aa13.72□□□□□ -0.21
COL1A1-209ENST00000495677 SDK2Q58EX2 2172 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 E5RJQ4 531 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 K7ERQ8 282 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 TSPAN6O43657 245 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 PPFIA2O75334 1257 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 ZNF821O75541 412 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 GP1BBP13224 206 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 ITGB7P26010 798 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 CCKBRP32239 447 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 IRAK1P51617 712 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 YPEL5P62699 121 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 NFKB2Q00653 900 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 CENPCQ03188 943 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 SLC20A2Q08357 652 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 SGCGQ13326 291 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 DPY19L3Q6ZPD9 716 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 DCAF4L2Q8NA75 395 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 KAT5Q92993 513 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 RAB7BQ96AH8 199 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 CEP44Q9C0F1 390 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 B3GNT4Q9C0J1 378 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 SLC25A18Q9H1K4 315 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 GEMIN8Q9NWZ8 242 aaKnown RBP13.71□□□□□ -0.21
COL1A1-209ENST00000495677 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 SEPT10Q9P0V9 454 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
COL1A1-209ENST00000495677 CXorf51AA0A1B0GTR3 108 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 CLEC18AA5D8T8 446 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 YY2O15391 372 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 SNAP91O60641 907 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ANXA6P08133 673 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 RRM1P23921 792 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 PRCPP42785 496 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 RECQLP46063 649 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-209ENST00000495677 NDUFA8P51970 172 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
COL1A1-209ENST00000495677 MORC3Q14149 939 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-209ENST00000495677 TGIF1Q15583 401 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 PRRT3Q5FWE3 981 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 EFHC1Q5JVL4 640 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 TPRG1LQ5T0D9 272 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 C22orf39Q6P5X5 142 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 DEFB106AQ8N104 65 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ZSCAN1Q8NBB4 408 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 CLEC18CQ8NCF0 446 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 OR6C4Q8NGE1 309 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 TMEM159Q96B96 161 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 CENPTQ96BT3 561 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 TMEM74Q96NL1 305 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 HEPHQ9BQS7 1158 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms