RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MRPL40Q9NQ50 206 aaKnown RBP9.1□□□□□ -0.95
GARNL3-219ENST00000495172 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 KCNG1Q9UIX4 513 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 OSGIN2Q9Y236 505 aa9.1□□□□□ -0.95
GARNL3-219ENST00000495172 LRP4O75096 1905 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 HEATR9A2RTY3 570 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 A6NCN8 305 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 ZSCAN5CA6NGD5 496 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 KPNA3O00505 521 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 KATNA1O75449 491 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 CLSTN1O94985 981 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 SRPRAP08240 638 aaKnown RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 FAM200BP0CF97 657 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 COX6B1P14854 86 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 ZNF18P17022 549 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 PDCP20941 246 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 RECQLP46063 649 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 RABIFP47224 123 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 CCL11P51671 97 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 CASP5P51878 434 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 HDAC4P56524 1084 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 B4GALNT1Q00973 533 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 POU5F1Q01860 360 aaKnown RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 PTK2Q05397 1052 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 DPYDQ12882 1025 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 MCM6Q14566 821 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 ACCSLQ4AC99 568 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 RNF219Q5W0B1 726 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 RUFY3Q7L099 469 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 CCDC186Q7Z3E2 898 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 FJX1Q86VR8 437 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 DCP2Q8IU60 420 aaKnown RBP9.09□□□□□ -0.95
GARNL3-219ENST00000495172 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 OR8D1Q8WZ84 308 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 EDEM1Q92611 657 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 PLD4Q96BZ4 506 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 RTP4Q96DX8 246 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 TWNKQ96RR1 684 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 SLC25A23Q9BV35 468 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 SLC13A1Q9BZW2 595 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 XYLT2Q9H1B5 865 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 ODF2LQ9ULJ1 636 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 POLHQ9Y253 713 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 HS3ST3A1Q9Y663 406 aa9.09□□□□□ -0.95
GARNL3-219ENST00000495172 IGLON5A6NGN9 336 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 CDKL5O76039 1030 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 KRT18P05783 430 aaKnown RBP9.08□□□□□ -0.96
GARNL3-219ENST00000495172 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
GARNL3-219ENST00000495172 GJB2P29033 226 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 ADRA1BP35368 520 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 PTGER4P35408 488 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 PFN3P60673 137 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 DUOXA2Q1HG44 320 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 CIR1Q86X95 450 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-219ENST00000495172 HID1Q8IV36 788 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 CHST14Q8NCH0 376 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 GPR156Q8NFN8 814 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 BTN2A2Q8WVV5 523 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 HAPLN3Q96S86 360 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 B3GNT4Q9C0J1 378 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 CLIC5Q9NZA1 410 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 LRIT1Q9P2V4 623 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 PCDHA5Q9Y5H7 936 aa9.08□□□□□ -0.96
GARNL3-219ENST00000495172 ABCA4P78363 2273 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 B4DGG1 531 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 F5H423 210 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 C19orf84I3L1E1 186 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 STK17BO94768 372 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 CD1EP15812 388 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 BPIP17213 487 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 KLK2P20151 261 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ALDH4A1P30038 563 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 IGFALSP35858 605 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 DLSTP36957 453 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 STAT5AP42229 794 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ITGA1P56199 1179 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 MAZP56270 477 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 YWHAGP61981 247 aaKnown RBP eCLIP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 MC1RQ01726 317 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 CDH18Q13634 790 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ELOAQ14241 798 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 POSTNQ15063 836 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 PLEKHN1Q494U1 663 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 TMEM119Q4V9L6 283 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ARSIQ5FYB1 569 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 CERCAMQ5T4B2 595 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 FAM46CQ5VWP2 391 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 TMEM198Q66K66 360 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 BHLHA9Q7RTU4 235 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ZNF720Q7Z2F6 126 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 TADA2BQ86TJ2 420 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 PIM3Q86V86 326 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 KDM1BQ8NB78 822 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 PTCD2Q8WV60 388 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 NRGNQ92686 78 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms