RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ZNF354CQ86Y25 554 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 RYBPQ8N488 228 aaPredicted RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 TMIEQ8NEW7 156 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 BAHD1Q8TBE0 780 aaPredicted RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 CPLX3Q8WVH0 158 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 HMCESQ96FZ2 354 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 HEPHQ9BQS7 1158 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 CNPY3Q9BT09 278 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 TMEM121BQ9BXQ6 578 aaPredicted RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 AIPL1Q9NZN9 384 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 MYO1AQ9UBC5 1043 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 PCSK1NQ9UHG2 260 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 GGT7Q9UJ14 662 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 MYO6Q9UM54 1294 aa10.82□□□□□ -0.68
NELFE-213ENST00000494956 ZFR2Q9UPR6 939 aaKnown RBP10.82□□□□□ -0.68
NELFE-213ENST00000494956 A0A1B0GTQ1 180 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 A0A1W2PQU0 124 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 RASA4BC9J798 803 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 SLC7A4O43246 635 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 RASA4O43374 803 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 RAMP2O60895 175 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 PRNPP04156 253 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 ZNF883P0CG24 379 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 ITIH2P19823 946 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 L1CAMP32004 1257 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 PBX1P40424 430 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 PRKCIP41743 596 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 ABL2P42684 1182 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 RECQLP46063 649 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 MAPKAPK2P49137 400 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CCT8P50990 548 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CLDN2P57739 230 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 FGL2Q14314 439 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 POLD3Q15054 466 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 CCDC157Q569K6 752 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 EFHC2Q5JST6 749 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 ACBD5Q5T8D3 534 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 HGSNATQ68CP4 663 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 NAPEPLDQ6IQ20 393 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CYP4V2Q6ZWL3 525 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 ERN2Q76MJ5 926 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 PARS2Q7L3T8 475 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 TRIM69Q86WT6 500 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 PCDH20Q8N6Y1 951 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 RTL3Q8N8U3 475 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 ZNF653Q96CK0 615 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CELF6Q96J87 481 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 CCDC114Q96M63 670 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 SNRNP25Q9BV90 132 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 MAGEH1Q9H213 219 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 HECAQ9UBI9 543 aaPredicted RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 CNOT8Q9UFF9 292 aaKnown RBP10.81□□□□□ -0.68
NELFE-213ENST00000494956 ITM2BQ9Y287 266 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 CHD8Q9HCK8 2581 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 ACACBO00763 2458 aa10.81□□□□□ -0.68
NELFE-213ENST00000494956 AKAP13Q12802 2813 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ANKRD36A6QL64 1941 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 FRYQ5TBA9 3013 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ANKRD62A6NC57 917 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TMEM191CA6NGB0 347 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TLR4O00206 839 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 KRIT1O00522 736 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 INSIG1O15503 277 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 FLRT2O43155 660 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 BUB1O43683 1085 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 KDELR3O43731 214 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 SDC3O75056 442 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TMCC1O94876 653 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 PCDH8O95206 1070 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ADRB3P13945 408 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TCF4P15884 667 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 CLDN6P56747 220 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 UBASH3AP57075 661 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 NXPH1P58417 271 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ZNF284Q2VY69 593 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TDRD12Q587J7 1177 aaKnown RBP10.8□□□□□ -0.68
NELFE-213ENST00000494956 UNQ6494/PRO21346Q6UXR6 183 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 RAB44Q7Z6P3 723 aaPredicted RBP10.8□□□□□ -0.68
NELFE-213ENST00000494956 TP53INP2Q8IXH6 220 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 GATA6Q92908 595 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 EXOC2Q96KP1 924 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 ELF4Q99607 663 aaPredicted RBP10.8□□□□□ -0.68
NELFE-213ENST00000494956 CEP44Q9C0F1 390 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 KDM4CQ9H3R0 1056 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 DHX35Q9H5Z1 703 aaKnown RBP10.8□□□□□ -0.68
NELFE-213ENST00000494956 DYRK4Q9NR20 520 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 IFNKQ9P0W0 207 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 AP4E1Q9UPM8 1137 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 MFHAS1Q9Y4C4 1052 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 PCDHGB2Q9Y5G2 931 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 LRRK1Q38SD2 2015 aa10.8□□□□□ -0.68
NELFE-213ENST00000494956 J3KR12 359 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms