RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LRRC69Q6ZNQ3 347 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 ZSCAN30Q86W11 494 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 FEM1CQ96JP0 617 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 RETREG1Q9H6L5 497 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 SAMSN1Q9NSI8 373 aaKnown RBP23.69■■□□□ 1.38
COL27A1-208ENST00000494780 MYLKQ15746 1914 aa23.69■■□□□ 1.38
COL27A1-208ENST00000494780 AP1G1O43747 822 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 ALPPL2P10696 532 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 ETFBP38117 255 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 DNA2P51530 1060 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 CCNHP51946 323 aaPredicted RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 NRG1Q02297 640 aaPredicted RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 ARL13BQ3SXY8 428 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 TCP11X2Q5H9J9 407 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 Q6ZSR6 202 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 PLPP6Q8IY26 295 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 DRC7Q8IY82 874 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 SLC22A18ASQ8N1D0 253 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 SNIP1Q8TAD8 396 aaKnown RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 ISG20Q96AZ6 181 aaKnown RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 CRELD1Q96HD1 420 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 BBC3Q96PG8 261 aaPredicted RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 SLC17A9Q9BYT1 436 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 METTL5Q9NRN9 209 aaKnown RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 FCF1Q9Y324 198 aaKnown RBP23.68■■□□□ 1.38
COL27A1-208ENST00000494780 FADS3Q9Y5Q0 445 aa23.68■■□□□ 1.38
COL27A1-208ENST00000494780 NEMP2A6NFY4 417 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 FFAR2O15552 330 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 RRP8O43159 456 aaKnown RBP23.67■■□□□ 1.38
COL27A1-208ENST00000494780 MT-CO3P00414 261 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 GIMD1P0DJR0 217 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 CKMT1AP12532 417 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 ATP11AP98196 1134 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 MAPK8IP2Q13387 824 aaPredicted RBP23.67■■□□□ 1.38
COL27A1-208ENST00000494780 KYAT3Q6YP21 454 aaKnown RBP23.67■■□□□ 1.38
COL27A1-208ENST00000494780 EMC1Q8N766 993 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 BAP1Q92560 729 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 BMFQ96LC9 184 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 GPR27Q9NS67 375 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 NLGN3Q9NZ94 848 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 OR12D3Q9UGF7 316 aa23.67■■□□□ 1.38
COL27A1-208ENST00000494780 NOCTQ9UK39 431 aaKnown RBP23.67■■□□□ 1.38
COL27A1-208ENST00000494780 CD160O95971 181 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 CYP1A1P04798 512 aaPredicted RBP23.66■■□□□ 1.38
COL27A1-208ENST00000494780 ITPKBP27987 946 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 ADRA1BP35368 520 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 MAPKAPK2P49137 400 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 HNRNPKP61978 463 aaKnown RBP eCLIP23.66■■□□□ 1.387e-9■■■■■ 29.7
COL27A1-208ENST00000494780 FGL2Q14314 439 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 MANEALQ5VSG8 457 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 PARS2Q7L3T8 475 aaKnown RBP23.66■■□□□ 1.38
COL27A1-208ENST00000494780 TMC6Q7Z403 805 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 PTAR1Q7Z6K3 402 aaPredicted RBP23.66■■□□□ 1.38
COL27A1-208ENST00000494780 FGF11Q92914 225 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 DUSP23Q9BVJ7 150 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 NUP62CLQ9H1M0 184 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 OSBPL2Q9H1P3 480 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 GANQ9H2C0 597 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 USP29Q9HBJ7 922 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 DNAJC28Q9NX36 388 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 HECAQ9UBI9 543 aaPredicted RBP23.66■■□□□ 1.38
COL27A1-208ENST00000494780 TRPM6Q9BX84 2022 aa23.66■■□□□ 1.38
COL27A1-208ENST00000494780 EIF4E1BA6NMX2 242 aaKnown RBP23.65■■□□□ 1.38
COL27A1-208ENST00000494780 SCAMP1O15126 338 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 PAK4O96013 591 aaPredicted RBP23.65■■□□□ 1.38
COL27A1-208ENST00000494780 RHOQP17081 205 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 MMP8P22894 467 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 SDC4P31431 198 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 GEMIN4P57678 1058 aaKnown RBP23.65■■□□□ 1.38
COL27A1-208ENST00000494780 CDR2Q01850 454 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 CCDC14Q49A88 953 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 SLC20A1Q8WUM9 679 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 RXFP2Q8WXD0 754 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 RAB7BQ96AH8 199 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 ZDHHC6Q9H6R6 413 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 EVA1BQ9NVM1 165 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 ACTL7AQ9Y615 435 aa23.65■■□□□ 1.38
COL27A1-208ENST00000494780 POM121BA6NF01 834 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 TSPAN6O43657 245 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 BRINP1O60477 761 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 GFPT2O94808 682 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 GP1BAP07359 652 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 ACTN2P35609 894 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 ACVRL1P37023 503 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 RABIFP47224 123 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 DUSP3P51452 185 aaPredicted RBP23.64■■□□□ 1.37
COL27A1-208ENST00000494780 FZD2Q14332 565 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 CDO1Q16878 200 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 C15orf59Q2T9L4 293 aaPredicted RBP23.64■■□□□ 1.37
COL27A1-208ENST00000494780 RAB6CQ53S08 254 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 RWDD4Q6NW29 188 aaKnown RBP23.64■■□□□ 1.37
COL27A1-208ENST00000494780 KDM7AQ6ZMT4 941 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 STRADAQ7RTN6 431 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 NLRP14Q86W24 1093 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 FAM181AQ8N9Y4 354 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 ASB12Q8WXK4 309 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 ARHGEF2Q92974 986 aaKnown RBP23.64■■□□□ 1.37
COL27A1-208ENST00000494780 APOLD1Q96LR9 279 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 LENG8Q96PV6 779 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms