RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GCNT7Q6ZNI0 430 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PARS2Q7L3T8 475 aaKnown RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PYROXD2Q8N2H3 581 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 TMIEQ8NEW7 156 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 OR13H1Q8NG92 308 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 FAM172AQ8WUF8 416 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 BAP1Q92560 729 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CNDP2Q96KP4 475 aaKnown RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 TM6SF2Q9BZW4 377 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PPARGC1AQ9UBK2 798 aaKnown RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 OR12D3Q9UGF7 316 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 DMTF1Q9Y222 760 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 RAXQ9Y2V3 346 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 SHROOM3Q8TF72 1996 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 RAD51BO15315 384 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 CCP110O43303 1012 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 DFNA5O60443 496 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 PRNPP04156 253 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 STAT1P42224 750 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 RXRGP48443 463 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 OGDHQ02218 1023 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 STX1AQ16623 288 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 INAVAQ3KP66 663 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TPRG1LQ5T0D9 272 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 E4F1Q66K89 784 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 RWDD4Q6NW29 188 aaKnown RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TRIM72Q6ZMU5 477 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ERN2Q76MJ5 926 aaKnown RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 STRADAQ7RTN6 431 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 IQCHQ86VS3 1027 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 HORMAD1Q86X24 394 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 DNAAF5Q86Y56 855 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TSC1Q92574 1164 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ARHGEF2Q92974 986 aaKnown RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ERGIC2Q96RQ1 377 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 SYT11Q9BT88 431 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 HDAC8Q9BY41 377 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 CEP44Q9C0F1 390 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 KLC2Q9H0B6 622 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 CCDC86Q9H6F5 360 aaKnown RBP11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ZDHHC6Q9H6R6 413 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TMEM248Q9NWD8 314 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 UCKL1Q9NWZ5 548 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 ITM2BQ9Y287 266 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 GPSM3Q9Y4H4 160 aa11.87□□□□□ -0.51
VTI1A-208ENST00000494728 TRABD2BA6NFA1 517 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 PRAMEF26H0Y7S4 382 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 TRIM38O00635 465 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 LDOC1O95751 146 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 PLEKP08567 350 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 THEGLP0DJG4 465 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 GIMD1P0DJR0 217 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 ADRB3P13945 408 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 RHOQP17081 205 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 ITGB7P26010 798 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 NSFP46459 744 aaKnown RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 ARRB1P49407 418 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 DNA2P51530 1060 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 RPL7AP62424 266 aaKnown RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 UBXN1Q04323 297 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 PROX2Q3B8N5 592 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 SLC45A4Q5BKX6 768 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 LRRC73Q5JTD7 316 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 ATXN7L2Q5T6C5 722 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 SLC25A45Q8N413 288 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 AOPEPQ8N6M6 819 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 C3orf20Q8ND61 904 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 NEK11Q8NG66 645 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 NTAN1Q96AB6 310 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 SKA1Q96BD8 255 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 TBC1D31Q96DN5 1066 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 MCEEQ96PE7 176 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 OSBPL2Q9H1P3 480 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 GPR27Q9NS67 375 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 ANO10Q9NW15 660 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
VTI1A-208ENST00000494728 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 FADS3Q9Y5Q0 445 aa11.86□□□□□ -0.51
VTI1A-208ENST00000494728 POM121BA6NF01 834 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 YKT6O15498 198 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms