RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 IRF2BP2Q7Z5L9 587 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 SLFN11Q7Z7L1 901 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 ZNF354CQ86Y25 554 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 MFSD2AQ8NA29 543 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 OR6K2Q8NGY2 324 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 SAP25Q8TEE9 199 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
MSH5-218ENST00000494646 KLHDC7BQ96G42 594 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 HEPHQ9BQS7 1158 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 TM6SF2Q9BZW4 377 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 FZD3Q9NPG1 666 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 TAS2R14Q9NYV8 317 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 HECAQ9UBI9 543 aaPredicted RBP9.79□□□□□ -0.84
MSH5-218ENST00000494646 CELSR3Q9NYQ7 3312 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 FAM149AA5PLN7 773 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 SMTNL1A8MU46 457 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 PRAMEF26H0Y7S4 382 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 TAF4O00268 1085 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 TNFSF14O43557 240 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 CREB3O43889 395 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 PCDHGA12O60330 932 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 SDC3O75056 442 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 LDOC1O95751 146 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 PAK4O96013 591 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 FERP16591 822 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 SERPINH1P50454 418 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 CLCN6P51797 869 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 CCNHP51946 323 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 CLDN2P57739 230 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 CCDC15Q0P6D6 951 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 SCAPQ12770 1279 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 POLD3Q15054 466 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 SETMARQ53H47 684 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 MANEALQ5VSG8 457 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 SEL1L3Q68CR1 1132 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 CAVIN1Q6NZI2 390 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 DNAJC24Q6P3W2 148 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 FBXL19Q6PCT2 694 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 DCUN1D2Q6PH85 259 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 DHRS13Q6UX07 377 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 CCNI2Q6ZMN8 369 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 NLRP14Q86W24 1093 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 TRIM69Q86WT6 500 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 MCOLN2Q8IZK6 566 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 C3orf20Q8ND61 904 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 ZCCHC14Q8WYQ9 949 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 TBC1D31Q96DN5 1066 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 MCEEQ96PE7 176 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 NAT10Q9H0A0 1025 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 ZDHHC6Q9H6R6 413 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 PREBQ9HCU5 417 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 TMEM248Q9NWD8 314 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 FTSJ1Q9UET6 329 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 HPCAL4Q9UM19 191 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 ZFR2Q9UPR6 939 aaKnown RBP9.78□□□□□ -0.84
MSH5-218ENST00000494646 DMTF1Q9Y222 760 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 WASF2Q9Y6W5 498 aa9.78□□□□□ -0.84
MSH5-218ENST00000494646 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 TCRBV5S1A1TA0A578 114 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 ENC1O14682 589 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 BUB1O43683 1085 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 KDELR3O43731 214 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 RAMP2O60895 175 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 CCDC172P0C7W6 258 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 THEGLP0DJG4 465 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 EPHB2P29323 1055 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 L1CAMP32004 1257 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 MAPKAPK2P49137 400 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 ARRB1P49407 418 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 ZNF143P52747 638 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 CLDN6P56747 220 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 GSCP56915 257 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 OGDHQ02218 1023 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 ZNF284Q2VY69 593 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 MON1BQ7L1V2 547 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 TMPRSS7Q7RTY8 843 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 HORMAD1Q86X24 394 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 PCDH20Q8N6Y1 951 aaKnown RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 BAP1Q92560 729 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 FEM1CQ96JP0 617 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 SLC17A9Q9BYT1 436 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 CEP44Q9C0F1 390 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 KLC2Q9H0B6 622 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 MAGEH1Q9H213 219 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 HAUS4Q9H6D7 363 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 FZD10Q9ULW2 581 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 ANKRD36A6QL64 1941 aa9.77□□□□□ -0.85
MSH5-218ENST00000494646 ANKRD11Q6UB99 2663 aaPredicted RBP9.77□□□□□ -0.85
MSH5-218ENST00000494646 ANKRD62A6NC57 917 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms