RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MSANTD4Q8NCY6 345 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 TMIEQ8NEW7 156 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 RFFLQ8WZ73 363 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 SHC3Q92529 594 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 FAM131CQ96AQ9 280 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 ZNF578Q96N58 590 aaPredicted RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 TBCBQ99426 244 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 IL12RB2Q99665 862 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 SLC17A9Q9BYT1 436 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 THSD1Q9NS62 852 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 RRN3Q9NYV6 651 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 ZFR2Q9UPR6 939 aaKnown RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 SATB2Q9UPW6 733 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 OR51B4Q9Y5P0 310 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 POM121BA6NF01 834 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 K7ESM1 405 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 RNF103O00237 685 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 KRIT1O00522 736 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 MUSKO15146 869 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 GADD45BO75293 160 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 C1QL1O75973 258 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 F9P00740 461 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 JUNDP17535 347 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 PON1P27169 355 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 CXCR3P49682 368 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 SERPINH1P50454 418 aaKnown RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 CCNHP51946 323 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 ATP11AP98196 1134 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 EIF4EBP2Q13542 120 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 CDO1Q16878 200 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 KIAA1161Q6NSJ0 714 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 FOXR2Q6PJQ5 311 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 EFL1Q7Z2Z2 1120 aaKnown RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 FAM131BQ86XD5 332 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ZDHHC17Q8IUH5 632 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ZNF548Q8NEK5 533 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 C18orf8Q96DM3 657 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 VCPIP1Q96JH7 1222 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 CFAP57Q96MR6 1250 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 HEPHQ9BQS7 1158 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 HDAC8Q9BY41 377 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ZYG11BQ9C0D3 744 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 POLR1BQ9H9Y6 1135 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ANLNQ9NQW6 1124 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ARHGEF38Q9NXL2 777 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 HECAQ9UBI9 543 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 RWDD2AQ9UIY3 292 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 AJAP1Q9UKB5 411 aaPredicted RBP9.82□□□□□ -0.84
UBR4-216ENST00000494503 DOLKQ9UPQ8 538 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 ITM2BQ9Y287 266 aa9.82□□□□□ -0.84
UBR4-216ENST00000494503 IGLON5A6NGN9 336 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 FOXN3O00409 490 aaPredicted RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 SCAMP1O15126 338 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 RAD51BO15315 384 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 AQP9O43315 295 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 GP1BAP07359 652 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 PLA2G2AP14555 144 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 ITGB7P26010 798 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 L1CAMP32004 1257 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 GKP32189 559 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 RABIFP47224 123 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 UCNP55089 124 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 BPIFB4P59827 614 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 GNA12Q03113 381 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 C1orf61Q13536 156 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 FZD2Q14332 565 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 DRAP1Q14919 205 aaPredicted RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 POLD3Q15054 466 aaPredicted RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 NR0B2Q15466 257 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 ZSCAN23Q3MJ62 389 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 SLC25A52Q3SY17 297 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 CARD16Q5EG05 197 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 OTUD1Q5VV17 481 aaPredicted RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 ZCCHC8Q6NZY4 707 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 GUSBP11Q6P575 273 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 KYAT3Q6YP21 454 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 PARS2Q7L3T8 475 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 ABI3BPQ7Z7G0 1075 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 PHLDB2Q86SQ0 1253 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 DCP2Q8IU60 420 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 ELOA2Q8IYF1 753 aaPredicted RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 ZNF843Q8N446 348 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 PCDH20Q8N6Y1 951 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 ATXN7L3BQ96GX2 97 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 NPY6RQ99463 290 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 APOBEC3BQ9UH17 382 aaKnown RBP9.81□□□□□ -0.84
UBR4-216ENST00000494503 DNAI1Q9UI46 699 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 HPCAL4Q9UM19 191 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 FADS3Q9Y5Q0 445 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 ACTL7AQ9Y615 435 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 WASF2Q9Y6W5 498 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms