RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PLRG1O43660 514 aaKnown RBP13.46□□□□□ -0.25
ERCC3-209ENST00000494464 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.25
ERCC3-209ENST00000494464 CD59P13987 128 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 METAP1P53582 386 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
ERCC3-209ENST00000494464 OGDHQ02218 1023 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 KIF5AQ12840 1032 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 MAMLD1Q13495 774 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 CCDC122Q5T0U0 273 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 AGBL4Q5VU57 503 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 RWDD4Q6NW29 188 aaKnown RBP13.46□□□□□ -0.25
ERCC3-209ENST00000494464 LINGO4Q6UY18 593 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 PCDH20Q8N6Y1 951 aaKnown RBP13.46□□□□□ -0.25
ERCC3-209ENST00000494464 DEFB124Q8NES8 71 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 OR14C36Q8NHC7 312 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 FNIP1Q8TF40 1166 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 MAGEH1Q9H213 219 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.25
ERCC3-209ENST00000494464 A0A1B0GVT2 93 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 TMCO5BA8MYB1 307 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.264e-6■■■□□ 15.1
ERCC3-209ENST00000494464 LATO43561 262 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RAMP2O60895 175 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ZNF821O75541 412 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PRNPP04156 253 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CTSLP07711 333 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CHRNA3P32297 505 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 HTR7P34969 479 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 NUDT1P36639 197 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CSNK1EP49674 416 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 GEMIN4P57678 1058 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SHC2P98077 582 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 HNRNPDQ14103 355 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ZNF569Q5MCW4 686 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ARHGEF2Q92974 986 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ISG20Q96AZ6 181 aaKnown RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 TRIM11Q96F44 468 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 EPAS1Q99814 870 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SPON2Q9BUD6 331 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 WASH4PA8MWX3 477 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 BNIP3LO60238 219 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RTN2O75298 545 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 MYBL1P10243 752 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ACVRL1P37023 503 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PPP2CBP62714 309 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PPP2CAP67775 309 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 HLA-BQ31612 363 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 VPS36Q86VN1 386 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 TRIM69Q86WT6 500 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PLPP6Q8IY26 295 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PYROXD2Q8N2H3 581 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SLC6A18Q96N87 628 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-209ENST00000494464 MAGEB5Q9BZ81 275 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 LACRTQ9GZZ8 138 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ISCUQ9H1K1 167 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 GAREM1Q9H706 876 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 EBF2Q9HAK2 575 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 IL36AQ9UHA7 158 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 SCINQ9Y6U3 715 aa13.45□□□□□ -0.26
ERCC3-209ENST00000494464 TMEM191CA6NGB0 347 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 ZSCAN5CA6NGD5 496 aaPredicted RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 PLK4O00444 970 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 VILLO15195 856 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 FGF10O15520 208 aaPredicted RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 CD160O95971 181 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 FTLP02792 175 aaPredicted RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 PSMA2P25787 234 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 EPHB2P29323 1055 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 CTSKP43235 329 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 MAGEA1P43355 309 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 KIF19Q2TAC6 998 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 PIP5KL1Q5T9C9 394 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 DPY19L3Q6ZPD9 716 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
ERCC3-209ENST00000494464 NAXDQ8IW45 347 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 CHST14Q8NCH0 376 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 ZNF653Q96CK0 615 aa13.44□□□□□ -0.26
ERCC3-209ENST00000494464 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms