RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 PIP4K2CQ8TBX8 421 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 GRIN3AQ8TCU5 1115 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 LRRN4Q8WUT4 740 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 OR8D1Q8WZ84 308 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 RUBCNQ92622 972 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 ARRDC3Q96B67 414 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 HSPA12BQ96MM6 686 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 GPR174Q9BXC1 333 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 CALN1Q9BXU9 219 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 GMEB2Q9UKD1 530 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 PPM1HQ9ULR3 514 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
UBA3-211ENST00000493957 ASCC3Q8N3C0 2202 aaKnown RBP11.87□□□□□ -0.51
UBA3-211ENST00000493957 TDRD6O60522 2096 aaKnown RBP11.87□□□□□ -0.51
UBA3-211ENST00000493957 A0A0A6YYK5 440 aaPredicted RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 LRRD1A4D1F6 860 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 MCF2LO15068 1137 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 PRAMEF11O60813 436 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 RNASEH1O60930 286 aaKnown RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 NDUFS2O75306 463 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 RHOBTB1O94844 696 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 RETP07949 1114 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 KRT7P08729 469 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 ITPKAP23677 461 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 KDELR1P24390 212 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 MAOBP27338 520 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 CHRNA3P32297 505 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 VAV2P52735 878 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 CREB5Q02930 508 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 CYTH1Q15438 398 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 TCEAL6Q6IPX3 200 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 TMCO3Q6UWJ1 677 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 SLC36A4Q6YBV0 504 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 PQLC3Q8N755 202 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 KCTD6Q8NC69 237 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 GANCQ8TET4 914 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 TCEAL3Q969E4 200 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 EXOC2Q96KP1 924 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 NEUROG2Q9H2A3 272 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 C6orf106Q9H6K1 298 aaPredicted RBP11.86□□□□□ -0.51
UBA3-211ENST00000493957 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 FBXL12Q9NXK8 326 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 LHX3Q9UBR4 397 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 ALG6Q9Y672 507 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 SLCO1B1Q9Y6L6 691 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 WASF2Q9Y6W5 498 aa11.86□□□□□ -0.51
UBA3-211ENST00000493957 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ARHGAP42A6NI28 874 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 INSIG1O15503 277 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 PJA2O43164 708 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 SPOPO43791 374 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 LEFTY1O75610 366 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 GJB3O75712 270 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 RNASEH2AO75792 299 aaKnown RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 ADH1BP00325 375 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 KRT1P04264 644 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 MPLP40238 635 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 RGRP47804 291 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZNF135P52742 658 aaPredicted RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 GSDMDP57764 484 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZBTB16Q05516 673 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZNF33AQ06730 810 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 CNTN1Q12860 1018 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 LLGL1Q15334 1064 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 SF3A2Q15428 464 aaKnown RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 FAM182AQ5T1J6 154 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 LYSMD4Q5XG99 296 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 CYP2U1Q7Z449 544 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 C11orf74Q86VG3 221 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 KIAA2013Q8IYS2 634 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 PIGKQ92643 395 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 KRT35Q92764 455 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZNF419Q96HQ0 510 aaPredicted RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 LOXL4Q96JB6 756 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 OMDQ99983 421 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZNF670Q9BS34 389 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 ZDHHC6Q9H6R6 413 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 SP110Q9HB58 689 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 FSCN3Q9NQT6 498 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 RXFP3Q9NSD7 469 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 RCOR3Q9P2K3 495 aaPredicted RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 UBA2Q9UBT2 640 aaPredicted RBP11.85□□□□□ -0.51
UBA3-211ENST00000493957 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms