RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 FBXO40Q9UH90 709 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 CCNL1Q9UK58 526 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 MKLN1Q9UL63 735 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 DTX4Q9Y2E6 619 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 MAP3K2Q9Y2U5 619 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 OR2A25A4D2G3 310 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 BTBD18B2RXH4 712 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SLC7A4O43246 635 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 NDUFS3O75489 264 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 NCR1O76036 304 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 CNTN5O94779 1100 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 TGDSO95455 350 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 PLATP00750 562 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 HEXAP06865 529 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 RHOP08100 348 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 NDUFS1P28331 727 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 CNR2P34972 360 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 STAT2P52630 851 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 MFAP4P55083 255 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 HDAC4P56524 1084 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 WDR5P61964 334 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 YWHAZP63104 245 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SHC2P98077 582 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 CEBPZQ03701 1054 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 LMAN2Q12907 356 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SF3B3Q15393 1217 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 CRY2Q49AN0 593 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 RABL3Q5HYI8 236 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 DCLRE1AQ6PJP8 1040 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 Q6ZSN1 163 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 GPR149Q86SP6 731 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 FAM160B2Q86V87 743 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 METTL23Q86XA0 190 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 NDUFAF2Q8N183 169 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 GHDCQ8N2G8 530 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 LINC01465Q8N7H1 131 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 IL17RCQ8NAC3 791 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 ABHD11Q8NFV4 315 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 DUSP19Q8WTR2 217 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 DEPDC1BQ8WUY9 529 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 FAM162AQ96A26 154 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 MMABQ96EY8 250 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 FYTTD1Q96QD9 318 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 GPATCH1Q9BRR8 931 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 TRPV4Q9HBA0 871 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SNTG1Q9NSN8 517 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 TBCCD1Q9NVR7 557 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 TMEM248Q9NWD8 314 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 PPP4R1LQ9P1A2 415 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 DKK2Q9UBU2 259 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 FBXL17Q9UF56 701 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 ANAPC5Q9UJX4 755 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 ANAPC2Q9UJX6 822 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 PPIEQ9UNP9 301 aaKnown RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 DHDHQ9UQ10 334 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 TRPV2Q9Y5S1 764 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SIRT4Q9Y6E7 314 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SPATA31A5Q5VU36 1347 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SPATA31A6Q5VVP1 1343 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 SPATA31A7Q8IWB4 1347 aa4.66□□□□□ -1.66
GTF3A-208ENST00000493903 MROH2BQ7Z745 1585 aa4.65□□□□□ -1.66
GTF3A-208ENST00000493903 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 TCRBV21S2A2A0A5A6 115 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 WDR46O15213 610 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 SEC31AO94979 1220 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ADAP00813 363 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 SERPINC1P01008 464 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ATP5BP06576 529 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ABCB1P08183 1280 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ZFXP17010 805 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 TMEM11P17152 192 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 TGM2P21980 687 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ITPKBP27987 946 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 TYK2P29597 1187 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 HIBADHP31937 336 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 CDAP32320 146 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 BUD31P41223 144 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 SKIV2L2P42285 1042 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 PIP4K2AP48426 406 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 CLK1P49759 484 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 GNAQP50148 359 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 PMS2P54278 862 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 FAM189BP81408 668 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 PSG6Q00889 435 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 DMWDQ09019 674 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 CRHR2Q13324 411 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 RNPS1Q15287 305 aaKnown RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ASIC2Q16515 512 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 RPE65Q16518 533 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 HIST2H2ACQ16777 129 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ASTE1Q2TB18 679 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-208ENST00000493903 EDRF1Q3B7T1 1238 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 ZNF628Q5EBL2 1059 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 PLAC9Q5JTB6 97 aa4.65□□□□□ -1.67
GTF3A-208ENST00000493903 COLEC12Q5KU26 742 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms