RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	HMCES	Q96FZ2	354 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	HSPA12B	Q96MM6	686 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	BBC3	Q96PG8	261 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PANX2	Q96RD6	677 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	FAM129B	Q96TA1	746 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	BTBD1	Q9H0C5	482 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	MIR1-1HG	Q9H1L0	117 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PABPC3	Q9H361	631 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	FBXL12	Q9NXK8	326 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CWC15	Q9P013	229 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	HS3ST2	Q9Y278	367 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ACTL7A	Q9Y615	435 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ITPR1	Q14643	2758 aa		10.62	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SOWAHD	A6NJG2	315 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	C1QTNF3-AMACR	E9PGA6	284 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ZMPSTE24	O75844	475 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CFI	P05156	583 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	AMPD1	P23109	780 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ITPKA	P23677	461 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	DPP6	P42658	865 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CLCN6	P51797	869 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	GEMIN4	P57678	1058 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	YBEY	P58557	167 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SIM1	P81133	766 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ARF5	P84085	180 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SLC25A11	Q02978	314 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PARP15	Q460N3	678 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ODF2	Q5BJF6	829 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SYCP2L	Q5T4T6	812 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	FAM46C	Q5VWP2	391 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CPNE8	Q86YQ8	564 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TMTC1	Q8IUR5	882 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SYT12	Q8IV01	421 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CCDC170	Q8IYT3	715 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	NETO2	Q8NC67	525 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	KCTD6	Q8NC69	237 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PIP4K2C	Q8TBX8	421 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	GRIN3A	Q8TCU5	1115 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	FOXJ1	Q92949	421 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ACE2	Q9BYF1	805 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TM6SF2	Q9BZW4	377 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	DYRK4	Q9NR20	520 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	KLHL11	Q9NVR0	708 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	WSB2	Q9NYS7	404 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	LCMT1	Q9UIC8	334 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SCML1	Q9UN30	329 aa		10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ARHGAP42	A6NI28	874 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	WASH4P	A8MWX3	477 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PLK4	O00444	970 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	KPNA3	O00505	521 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	KDELR3	O43731	214 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	FSBP	O95073	299 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SEMA4F	O95754	770 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	C5AR1	P21730	350 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	MAOB	P27338	520 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CDC25B	P30305	580 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CHRNA3	P32297	505 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ACSL1	P33121	698 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	HOXD12	P35452	270 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	VASP	P50552	380 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ZNF135	P52742	658 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	RHOA	P61586	193 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SERINC3	Q13530	473 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	DPYSL2	Q16555	572 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ATP13A4	Q4VNC1	1196 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TRIM61	Q5EBN2	209 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CARD16	Q5EG05	197 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	WDR45B	Q5MNZ6	344 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TMCO3	Q6UWJ1	677 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SLC41A1	Q8IVJ1	513 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	UMODL1-AS1	Q8N2C9	162 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PCDH20	Q8N6Y1	951 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CHST14	Q8NCH0	376 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	OR2A12	Q8NGT7	310 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	OR6K2	Q8NGY2	324 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	OR14C36	Q8NHC7	312 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TEKT4	Q8WW24	435 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	BAG1	Q99933	345 aa	Predicted RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CALN1	Q9BXU9	219 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	CEP44	Q9C0F1	390 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SLC39A8	Q9C0K1	460 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	KLC2	Q9H0B6	622 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	NEUROG2	Q9H2A3	272 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SLC32A1	Q9H598	525 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	NOL6	Q9H6R4	1146 aa	Known RBP	10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	ZDHHC6	Q9H6R6	413 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SP110	Q9HB58	689 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	SGK2	Q9HBY8	427 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PCDH18	Q9HCL0	1135 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	IMPACT	Q9P2X3	320 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PILRB	Q9UKJ0	227 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	INTU	Q9ULD6	942 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	TFR2	Q9UP52	801 aa		10.6	□□□□□ -0.71
TRAPPC12-222	ENST00000493792	PCDHA13	Q9Y5I0	950 aa		10.6	□□□□□ -0.71

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