RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ATG13O75143 517 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 GCATO75600 419 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 ECEL1O95672 775 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 PEX11BO96011 259 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 GSRP00390 522 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 JCHAINP01591 159 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 RBL1P28749 1068 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 MAGEA9P43362 315 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
SNX17-208ENST00000493711 CSNK1DP48730 415 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 RAD51Q06609 339 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 SIGLEC14Q08ET2 396 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 GRM3Q14832 879 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 P3H1Q32P28 736 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 TEX44Q53QW1 395 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 CCDC70Q6NSX1 233 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 SERPINA13PQ6UXR4 307 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 ARHGAP36Q6ZRI8 547 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 ALLCQ8N6M5 410 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 ZNF513Q8N8E2 541 aaPredicted RBP12.64□□□□□ -0.39
SNX17-208ENST00000493711 FAM71DQ8N9W8 422 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 MRGPRX3Q96LB0 322 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 IER2Q9BTL4 223 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 POLR1EQ9GZS1 481 aaKnown RBP12.64□□□□□ -0.39
SNX17-208ENST00000493711 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 USP29Q9HBJ7 922 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 FBRSL1Q9HCM7 1045 aaKnown RBP12.64□□□□□ -0.39
SNX17-208ENST00000493711 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX17-208ENST00000493711 SEPT10Q9P0V9 454 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 KRBA1A5PL33 1030 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 KCNK1O00180 336 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 NDC80O14777 642 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 TMCC1O94876 653 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 IGSF6O95976 241 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 EGFP01133 1207 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 SRCP12931 536 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GLDCP23378 1020 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 PTPN3P26045 913 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 NTSR1P30989 418 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 KIR2DL1P43626 348 aaPredicted RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 RHOAP61586 193 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 SLC10A7Q0GE19 358 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 ENPP2Q13822 863 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 CCINQ13939 588 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 ZNF234Q14588 700 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 DLG2Q15700 870 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 SLC14A2Q15849 920 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 PTPRNQ16849 979 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GLE1Q53GS7 698 aaKnown RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 EOGTQ5NDL2 527 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 NAIF1Q69YI7 327 aaPredicted RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 ARHGEF18Q6ZSZ5 1173 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 CCDC33Q8N5R6 958 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 NETO2Q8NC67 525 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 LRRC45Q96CN5 670 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 TEKT5Q96M29 485 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 SPATA13Q96N96 652 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 FAM118BQ9BPY3 351 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 MFSD1Q9H3U5 465 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 LTB4R2Q9NPC1 389 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 PAK5Q9P286 719 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 KLHL8Q9P2G9 620 aaPredicted RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
SNX17-208ENST00000493711 ATP8A1Q9Y2Q0 1164 aa12.63□□□□□ -0.39
SNX17-208ENST00000493711 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 SHISA7A6NL88 538 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 FAM170BA6NMN3 283 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ALOX15BO15296 676 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 PSMD3O43242 534 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ANXA9O76027 345 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 CD160O95971 181 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 MT-CO1P00395 513 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 VAV1P15498 845 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 CA4P22748 312 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
SNX17-208ENST00000493711 AP1S1P61966 158 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 DR1Q01658 176 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 WASHC5Q12768 1159 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 STARD3Q14849 445 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 UBXN2BQ14CS0 331 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 CYTH1Q15438 398 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms