RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CAPN6Q9Y6Q1 641 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 NUMA1Q14980 2115 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 PATE3B3GLJ2 98 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 K7ERQ8 282 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 KDELR3O43731 214 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ATP9BO43861 1147 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ZMPSTE24O75844 475 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 FTCDO95954 541 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 MT-CO1P00395 513 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 VAV1P15498 845 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 NDUFV2P19404 249 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 BCKDHBP21953 392 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 DPP6P42658 865 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 CLCN6P51797 869 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 SERINC3Q13530 473 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 CAMK2GQ13555 558 aaPredicted RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 DLG2Q15700 870 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 UAP1L1Q3KQV9 507 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 Q6ZVU0 165 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 LPCAT2Q7L5N7 544 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ARHGAP12Q8IWW6 846 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ATPAF2Q8N5M1 289 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 LZTR1Q8N653 840 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 LRRC57Q8N9N7 239 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 KDF1Q8NAX2 398 aaPredicted RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 OR2T3Q8NH03 318 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 PCDH19Q8TAB3 1148 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 KRT35Q92764 455 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 FAF2Q96CS3 445 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 NUSAP1Q9BXS6 441 aaKnown RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 KLC2Q9H0B6 622 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 FBRSQ9HAH7 460 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 CD248Q9HCU0 757 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 PRSS16Q9NQE7 514 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 EVLQ9UI08 416 aaPredicted RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 RALYQ9UKM9 306 aaKnown RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
CTSA-209ENST00000493522 ACTL7AQ9Y615 435 aa11.81□□□□□ -0.52
CTSA-209ENST00000493522 ABCA7Q8IZY2 2146 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 DMXL2Q8TDJ6 3036 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 TARSL2A2RTX5 802 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 APOL1O14791 398 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 MAP3K13O43283 966 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 SMAD6O43541 496 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 IL4RP24394 825 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 CTNNA2P26232 953 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 CTNNA1P35221 906 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 RECQLP46063 649 aaPredicted RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 PSMD8P48556 350 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 VASPP50552 380 aaPredicted RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 PAPOLAP51003 745 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 DNA2P51530 1060 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 COPAP53621 1224 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 DYNLT1P63172 113 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 IRX4P78413 519 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 BYSLQ13895 437 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 TRIM61Q5EBN2 209 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 AFMIDQ63HM1 303 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 ZNF776Q68DI1 518 aaPredicted RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 NCBP2-AS2Q69YL0 99 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 MFSD7Q6UXD7 560 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 SPOCD1Q6ZMY3 1216 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 ARHGAP36Q6ZRI8 547 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 NT5DC3Q86UY8 548 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 SYT12Q8IV01 421 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 TP53INP2Q8IXH6 220 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 STK40Q8N2I9 435 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 RBM41Q96IZ5 413 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 MRGPRX1Q96LB2 322 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 CCDC114Q96M63 670 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 RNF157Q96PX1 679 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 ALS2CR12Q96Q35 445 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 MAK16Q9BXY0 300 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 MKRN2Q9H000 416 aaKnown RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 TNKS2Q9H2K2 1166 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 SLC32A1Q9H598 525 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 UBA2Q9UBT2 640 aaPredicted RBP11.8□□□□□ -0.52
CTSA-209ENST00000493522 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
CTSA-209ENST00000493522 PLXNA2O75051 1894 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 CCDC66A2RUB6 948 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 C3orf70A6NLC5 250 aaPredicted RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 ZNF487B1APH4 448 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 PRAMEF11O60813 436 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 RNASEH1O60930 286 aaKnown RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 TMCC1O94876 653 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 MAP3K6O95382 1288 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 SPINK2P20155 84 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 P2RY2P41231 377 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 MAPK8P45983 427 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 SLC20A2Q08357 652 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 ELAVL3Q14576 367 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms