RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PCDHGA4Q9Y5G9 962 aa14.55□□□□□ -0.08
PRPF40A-211ENST00000493468 FADS3Q9Y5Q0 445 aa14.55□□□□□ -0.08
PRPF40A-211ENST00000493468 DOCK4Q8N1I0 1966 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 SPTAN1Q13813 2472 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 A0A1B0GVL5 298 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 D6RAR5 112 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 RNF103O00237 685 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 SPINT1O43278 529 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 PAK4O96013 591 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 F13A1P00488 732 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 ZSCAN22P10073 491 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 ADRB3P13945 408 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 CCKBRP32239 447 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 IRAK1P51617 712 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 CDH4P55283 916 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 PITX1P78337 314 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 TGIF1Q15583 401 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 TPRG1LQ5T0D9 272 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 C22orf39Q6P5X5 142 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 TMEM110Q86TL2 294 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 DCAF4L2Q8NA75 395 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 CHST14Q8NCH0 376 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 C1QTNF2Q9BXJ5 285 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 MUC3BQ9H195 1237 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 SLC25A18Q9H1K4 315 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 FAM204AQ9H8W3 233 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 GEMIN8Q9NWZ8 242 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 VPS51Q9UID3 782 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 VANGL2Q9ULK5 521 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 PADI4Q9UM07 663 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 WASF2Q9Y6W5 498 aa14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 USP9XQ93008 2570 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-211ENST00000493468 MYO9AB2RTY4 2548 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 NBASA2RRP1 2371 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 UNC13CQ8NB66 2214 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 LRP4O75096 1905 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 FAM237AA0A1B0GTK4 181 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 CLEC18AA5D8T8 446 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 K7ELQ4 463 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 CASC3O15234 703 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 GCATO75600 419 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 LEFTY1O75610 366 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 ANXA6P08133 673 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 CDK17Q00537 523 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 SRSF6Q13247 344 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 PTK2BQ14289 1009 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 TBR1Q16650 682 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 ARSIQ5FYB1 569 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 ESRP1Q6NXG1 681 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 CLEC18BQ6UXF7 455 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 B3GNT8Q7Z7M8 397 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 JAMLQ86YT9 394 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 PHACTR4Q8IZ21 702 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 RBFAQ8N0V3 343 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 PPM1KQ8N3J5 372 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 ZSCAN1Q8NBB4 408 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 CLEC18CQ8NCF0 446 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 GRIN3AQ8TCU5 1115 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 TMEM74Q96NL1 305 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 SLC2A13Q96QE2 648 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 LRRC61Q9BV99 259 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 ADNPQ9H2P0 1102 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 EPB41L5Q9HCM4 733 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 DDIT4Q9NX09 232 aa14.53□□□□□ -0.08
PRPF40A-211ENST00000493468 E5RJQ4 531 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 K7ERQ8 282 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SMAD6O43541 496 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 TSPAN6O43657 245 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SNAP91O60641 907 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 GLI1P08151 1106 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 RRM1P23921 792 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 L1CAMP32004 1257 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SYKP43405 635 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 RECQLP46063 649 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 FMO5P49326 533 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 FKBP3Q00688 224 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 GCNT1Q02742 428 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SGCGQ13326 291 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SERINC3Q13530 473 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 MORC3Q14149 939 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 PRRT3Q5FWE3 981 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 MANEAQ5SRI9 462 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 DPY19L3Q6ZPD9 716 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SETD3Q86TU7 594 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 ARL10Q8N8L6 244 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 KAT5Q92993 513 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 RAB7BQ96AH8 199 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 TMEM159Q96B96 161 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 GFM1Q96RP9 751 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 FUCA2Q9BTY2 467 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 CEP44Q9C0F1 390 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 SYNDIG1Q9H7V2 258 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 METTL14Q9HCE5 456 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 ASNSD1Q9NWL6 643 aa14.52□□□□□ -0.09
PRPF40A-211ENST00000493468 ARMCX3Q9UH62 379 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms