RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ARID1BQ8NFD5 2236 aaPredicted RBP8.93□□□□□ -0.98
NUP50-217ENST00000491860 URB1O60287 2271 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 A0A087WV48 116 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 A0A0D9SEW6 157 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 TRABD2BA6NFA1 517 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 C2CD4BA6NLJ0 364 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 EIF4E1BA6NMX2 242 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 A6NNZ2 444 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 EIF3CLB5ME19 914 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 TOR1BO14657 336 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 RAMP2O60895 175 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 LEFTY1O75610 366 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 MBD3O95983 291 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 GSRP00390 522 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 MT-CO1P00395 513 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 CTSLP07711 333 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 UNGP13051 313 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 ADRB3P13945 408 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 TFE3P19532 575 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 CDK11BP21127 795 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 ACP1P24666 158 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 RABIFP47224 123 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ACADVLP49748 655 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 DUSP3P51452 185 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 DNA2P51530 1060 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 SUOXP51687 545 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 TAS2R38P59533 333 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 HNRNPKP61978 463 aaKnown RBP eCLIP8.92□□□□□ -0.98
NUP50-217ENST00000491860 ATP11AP98196 1134 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 FMO1Q01740 532 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 MYL5Q02045 173 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 C1QBPQ07021 282 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 SGCGQ13326 291 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ZNF211Q13398 564 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 SHBQ15464 509 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 STX1AQ16623 288 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ZNF284Q2VY69 593 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 INO80DQ53TQ3 878 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 MANEALQ5VSG8 457 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 RWDD4Q6NW29 188 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 DHRS13Q6UX07 377 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 DPY19L3Q6ZPD9 716 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ABI3BPQ7Z7G0 1075 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 SPATS2Q86XZ4 545 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 PHF13Q86YI8 300 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 GATAD2AQ86YP4 633 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 EID2Q8N6I1 236 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 OR7D4Q8NG98 312 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 MDM1Q8TC05 714 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 RFFLQ8WZ73 363 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 TSC1Q92574 1164 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 CENPIQ92674 756 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 EIF3CQ99613 913 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 C11orf70Q9BRQ4 267 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 C1QTNF7Q9BXJ2 289 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 NAT10Q9H0A0 1025 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 CATSPERBQ9H7T0 1116 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ANLNQ9NQW6 1124 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 LMBRD1Q9NUN5 540 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 ADAM22Q9P0K1 906 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 HECAQ9UBI9 543 aaPredicted RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 ZNF212Q9UDV6 495 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 LIMA1Q9UHB6 759 aaKnown RBP8.92□□□□□ -0.98
NUP50-217ENST00000491860 MYO6Q9UM54 1294 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 RAXQ9Y2V3 346 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 WASF2Q9Y6W5 498 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 KALRNO60229 2985 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 DOCK9Q9BZ29 2069 aa8.92□□□□□ -0.98
NUP50-217ENST00000491860 BPTFQ12830 3046 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 LRRC10BA6NIK2 292 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 SIGLEC16A6NMB1 481 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 LGALS16A8MUM7 142 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 I6L893 689 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 FPGTO14772 594 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 SLC31A1O15431 190 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 POP4O95707 220 aaKnown RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 GP1BAP07359 652 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FERP16591 822 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 GPD1P21695 349 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CCNHP51946 323 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 METAP1P53582 386 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 YBEYP58557 167 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 DAB2P98082 770 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 GRM3Q14832 879 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CDO1Q16878 200 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 POM121L1PQ3SYA9 428 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CCDC14Q49A88 953 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 TMEM259Q4ZIN3 620 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 ZNF805Q5CZA5 627 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 LINGO4Q6UY18 593 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 KYAT3Q6YP21 454 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms