RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SIGLEC16A6NMB1 481 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 SLC7A4O43246 635 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 BNIP3LO60238 219 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 LRIG2O94898 1065 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 CHRNA3P32297 505 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 KRT83P78385 493 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 OGDHQ02218 1023 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 GNA12Q03113 381 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 TEAD4Q15561 434 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 ZNF783Q6ZMS7 281 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 RAB44Q7Z6P3 723 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 GLRX5Q86SX6 157 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 DNAAF5Q86Y56 855 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 PYROXD2Q8N2H3 581 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 CHCHD4Q8N4Q1 142 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 PNPLA1Q8N8W4 532 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 CTNNBL1Q8WYA6 563 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 ZNF653Q96CK0 615 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 VCPIP1Q96JH7 1222 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 SPON2Q9BUD6 331 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 NOL6Q9H6R4 1146 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-206ENST00000491668 ZFYVE26Q68DK2 2539 aa12.96□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 CBX4O00257 560 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 CCP110O43303 1012 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 DKK1O94907 266 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 NDUFA10O95299 355 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 PROS1P07225 676 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 FTH1P19P0C7X4 201 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 MYBL1P10243 752 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 DESP17661 470 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 GPD1P21695 349 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 MAT2AP31153 395 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 SERPINH1P50454 418 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 CLCN6P51797 869 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 IL9RQ01113 521 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 SCAPQ12770 1279 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 ST3GAL2Q16842 350 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 TMIEQ8NEW7 156 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 NTAN1Q96AB6 310 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 ISCUQ9H1K1 167 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 ATP13A1Q9HD20 1204 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 CA5BQ9Y2D0 317 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 NEUROG3Q9Y4Z2 214 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 WASF2Q9Y6W5 498 aa12.95□□□□□ -0.34
SEC61A1-206ENST00000491668 LAMA5O15230 3695 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 A0A1B0GTQ1 180 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 FAM221BA6H8Z2 402 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 C1QTNF3-AMACRE9PGA6 284 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 PCDHGA12O60330 932 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ATXN1LP0C7T5 689 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 RHOQP17081 205 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 FECHP22830 423 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 CD38P28907 300 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 MAGEA1P43355 309 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 RWDD4Q6NW29 188 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 DCUN1D2Q6PH85 259 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 TRIM69Q86WT6 500 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 GRIN3AQ8TCU5 1115 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ADAMTS14Q8WXS8 1223 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ARHGEF2Q92974 986 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 CAAP1Q9H8G2 361 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms